bgruening / galaxy-rna-workbenchView external linksLinks
Galaxy RNA workbench
☆41Oct 10, 2020Updated 5 years ago
Alternatives and similar repositories for galaxy-rna-workbench
Users that are interested in galaxy-rna-workbench are comparing it to the libraries listed below
Sorting:
- RNAlien - unsupervised RNA family model construction☆13Jun 8, 2021Updated 4 years ago
- 🔝 The amazing Galaxy Tour Builder web extension. // See demo 👉☆17Jun 2, 2020Updated 5 years ago
- "The who the what the huh?" is our pipeline for converting bcl files to fastq and performing QC.☆11Sep 19, 2022Updated 3 years ago
- Dockerfiles to build Galaxy images☆24Aug 22, 2023Updated 2 years ago
- Efficient target prediction incorporating accessibility of interaction sites☆49Sep 18, 2025Updated 4 months ago
- A pipeline for structural clustering of RNA secondary structures☆15Apr 21, 2021Updated 4 years ago
- Galaxy Workflow Format 2☆10Jan 6, 2026Updated last month
- Testing module for Galaxy workflows☆10Jul 31, 2018Updated 7 years ago
- UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)☆22Feb 10, 2026Updated last week
- Useful tricks and tipps for Galaxy users☆12Nov 17, 2022Updated 3 years ago
- (Deprecated) Ansible roles to configure assorted compontents for an Ubuntu VM or container configured with https://github.com/galaxyproje…☆11Nov 9, 2024Updated last year
- Rcount: simple and flexible RNA-Seq read counting☆12May 19, 2022Updated 3 years ago
- Docker Images tracking the stable Galaxy releases.☆236Jan 9, 2026Updated last month
- ☆12Jan 21, 2016Updated 10 years ago
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 6 years ago
- ☆14Aug 30, 2025Updated 5 months ago
- AlignerBoost is a generalized software toolkit for boosting Next-Gen sequencing mapping precision using a Bayesian based mapping quality …☆11Mar 1, 2022Updated 3 years ago
- Galaxy Workflows maintained by the Intergalactic Workflow Commission☆44Updated this week
- Galaxy process management and system administration tools☆13Jan 20, 2026Updated 3 weeks ago
- Transcript assembly tool using multiple change-point inference to improve 3'UTR annotation☆13Dec 2, 2022Updated 3 years ago
- Python wrapper around the popular ChIP-Seq peak caller SICER☆15Dec 7, 2017Updated 8 years ago
- Long Approximate Matches-based Split Aligner☆13Apr 6, 2017Updated 8 years ago
- A Modern Perl Framework for High Throughput Sequencing analysis☆17May 6, 2020Updated 5 years ago
- Multi-sample transcriptome assembly from RNA-Seq☆25Jun 10, 2018Updated 7 years ago
- Alignment of RNAs☆25Jul 31, 2024Updated last year
- flexible barcode and adapter removal☆80Feb 10, 2023Updated 3 years ago
- Next generation sequencing (NGS/HTS) tools.☆19Jan 25, 2024Updated 2 years ago
- useful command-line tools written to showcase hts-nim☆50Nov 10, 2020Updated 5 years ago
- Galaxy Image Analysis is an ELIXIR Service for computer-based image analysis in Galaxy.☆20Feb 9, 2026Updated last week
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Nov 5, 2024Updated last year
- de Bruijn Graph REAd mapping Tool☆14Jul 12, 2017Updated 8 years ago
- A program for summarising CpG methylation patterns☆20Sep 9, 2016Updated 9 years ago
- JAMM Peak Finder for Sequencing Datasets☆30Mar 12, 2020Updated 5 years ago
- A R/shiny web application to browse and compare public RNA-seq / ChIP-seq / CAGE datasets☆18Jul 10, 2020Updated 5 years ago
- Ansible playbook for managing UseGalaxy.eu infrastructure.☆24Updated this week
- A collection of Galaxy-related training material☆346Updated this week
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Jun 23, 2016Updated 9 years ago
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Oct 31, 2025Updated 3 months ago
- Galaxy Admin Training☆60Dec 5, 2025Updated 2 months ago