Template-based RNA secondary structure visualization
☆29Aug 31, 2026Updated 3 weeks ago
Alternatives and similar repositories for traveler
Users that are interested in traveler are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python implementation of the FR3D software for searching and annotating RNA 3D structures☆26Updated this week
- Webserver & command-line tool for search of APO (unbound) protein structures from HOLO (bound) forms and vice versa. http://apoholo.cz☆19Jun 14, 2024Updated 2 years ago
- awesome tools for RNA☆17Nov 15, 2022Updated 3 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆87Sep 13, 2026Updated 2 weeks ago
- Web application for protein-ligand binding sites analysis and visualization☆20Aug 22, 2026Updated last month
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Create force-directed graphs of RNA secondary structures.☆115Jun 6, 2020Updated 6 years ago
- Centroid RNA package☆20Oct 12, 2020Updated 5 years ago
- A platform to do RNA science☆28Mar 7, 2021Updated 5 years ago
- MOLeculAR structure annoTator☆33Oct 2, 2024Updated last year
- RNA Structural Covariation Above Phylogenetic Expectation☆25Sep 21, 2026Updated last week
- A pipeline for structural clustering of RNA secondary structures☆15Apr 21, 2021Updated 5 years ago
- State of the art software for RNA sequence design. The first to solve the Eterna benchmark!☆16Jul 17, 2024Updated 2 years ago
- ☆17Aug 13, 2026Updated last month
- ☆18May 11, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python application for finding apo and holo structures for user-defined protein-ligand interactions☆10Feb 7, 2023Updated 3 years ago
- An RNA manipulation library.☆56Feb 16, 2024Updated 2 years ago
- Scripts for the creation of CryptoBench, a new dataset of cryptic binding sites☆22Jun 24, 2026Updated 3 months ago
- The Protein Feature View - a SVG library for visualising protein annotations☆13Sep 18, 2017Updated 9 years ago
- Rapid mining of RNA structure motifs from profiling data.☆15Oct 20, 2021Updated 4 years ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆185Updated this week
- RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.io☆14Nov 3, 2022Updated 3 years ago
- Fast embedding ot multidimensional datasets, great for cytometry data☆26Mar 8, 2026Updated 6 months ago
- Visualize global properties of large RNAs using GraphViz force-directed layout.☆24Sep 7, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- RNA secondary structure prediction tool☆21Aug 25, 2026Updated last month
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆70May 8, 2026Updated 4 months ago
- Analysis pipeline for RNA structural probing mutational profiling data sequenced on Nanopore devices☆11Feb 10, 2024Updated 2 years ago
- scOntoMatch is an R package which unifies ontology annotation of scRNA-seq datasets to make them comparable across studies☆11Oct 27, 2023Updated 2 years ago
- ggplot2 grab bag.☆16Nov 30, 2025Updated 9 months ago
- Base pair-augmented SE(3)-flow matching for conditional RNA 3D structure generation☆29Aug 8, 2026Updated last month
- An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions☆15Mar 4, 2025Updated last year
- QRNAS: Quick Refinement of Nucleic Acid Structures☆18Apr 30, 2025Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆71Jun 16, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Draw RNA secondary structures in python.☆54Jun 24, 2025Updated last year
- The ViennaRNA Package☆436Feb 24, 2026Updated 7 months ago
- rnalib: a python-based transcriptomics library☆14Jul 27, 2026Updated 2 months ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆31Aug 9, 2024Updated 2 years ago
- Explore the Hi-Cs☆12Jul 25, 2026Updated 2 months ago
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 5 years ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆21May 20, 2025Updated last year