ylab-hi / pxblatLinks
PxBLAT: An Efficient and Ergonomic Python Binding Library for BLAT
☆17Updated this week
Alternatives and similar repositories for pxblat
Users that are interested in pxblat are comparing it to the libraries listed below
Sorting:
- The Zavolab Automated RNA-seq Pipeline☆35Updated 3 weeks ago
- An efficient CLI to extract sequences from the SRA☆111Updated last week
- ClairS-TO - a deep-learning method for tumor-only somatic variant calling☆66Updated 4 months ago
- seqfu - Sequece Fastx Utilities☆119Updated 6 months ago
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆34Updated last week
- expressions on VCFs☆85Updated 3 months ago
- Fast FASTQ sample demultiplexing in Rust.☆63Updated 2 months ago
- Python bindings for the TaxonKit library☆41Updated last month
- long read RNA-seq quantification☆89Updated this week
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆50Updated 10 months ago
- Module for embedding igv.js in an IPython notebook☆76Updated 6 months ago
- Ultra-fast 5' and 3' demultiplexer☆27Updated last year
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆53Updated 5 months ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆93Updated 2 months ago
- Interactive multiscale visualization for structural variation in human genomes☆70Updated last week
- Get, parse, and extract information from the SRA metadata files☆44Updated 2 years ago
- Merging paired-end reads and removing adapters☆45Updated 4 months ago
- A tool for projecting genomic alignments to transcriptomic coordinates☆36Updated last year
- ClairS - a deep-learning method for long-read somatic small variant calling☆87Updated last month
- Variant calling tool for long-read sequencing data☆112Updated 4 months ago
- Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.☆42Updated last month
- Creating alignment plots from bam files