Alternatives and similar repositories for Pan_fetal_immune:

Users that are interested in Pan_fetal_immune are comparing it to the libraries listed below

• LungCellAtlas / scRNAseq_pipelines
  Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
  ☆36Updated 4 years ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆31Updated 3 years ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆64Updated 6 months ago
• ThomasJamesMitchell / deSCeRNAMut
  Method for de novo mutation calling from droplet based single cell RNA seq data
  ☆14Updated 3 years ago
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆21Updated 2 years ago
• HectorRDB / condiments
  Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression
  ☆28Updated 5 months ago
• Single-Cell-Genomics-Group-CNAG-CRG / TonsilAtlas
  Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)
  ☆28Updated 3 months ago
• buenrostrolab / FigR
  Functional Inference of Gene Regulation
  ☆43Updated 10 months ago
• bioinfo-biols / SEVtras
  sEV-containing droplet identification in scRNA-seq data (SEVtras)
  ☆25Updated 2 months ago
• Xiaxy-XuLab / PanCAF
  ☆37Updated 2 years ago
• teresho4 / scRNA-seq_atlas_Hs_PBMC_aging
  ☆15Updated last year
• shyhihihi / MERCI
  MERCI for tracing of mitochondrion transfer between single cancer and T cells
  ☆21Updated 11 months ago
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆44Updated last month
• aet21 / SCENT
  Estimation of Single-Cell Potency with Single Cell Entropy
  ☆40Updated 2 years ago
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆48Updated 2 weeks ago
• msraredon / NICHES
  Niche Interactions and Cellular Heterogeneity in Extracellular Signaling
  ☆52Updated last week
• smorabit / hdWGCNA_paper
  Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
  ☆16Updated last year
• Coolgenome / iTALK
  ☆60Updated 5 years ago
• Lan-lab / sc-GC
  ☆30Updated 2 years ago
• bei-lab / scRNA-AHCA
  Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs
  ☆39Updated last year
• data2intelligence / CytoSig
  ☆50Updated 7 months ago
• alserglab / mascarade
  Generate masks for scRNA-seq clusters on t-SNE or UMAP plots
  ☆26Updated this week
• SiyuanHuang1 / cpplot
  Visualize the results of cell-cell communication analysis
  ☆22Updated 2 years ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆31Updated 5 months ago
• matanhofree / crc-immune-hubs
  Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…
  ☆39Updated 3 years ago
• ZJUFanLab / CellTalkDB
  A manually curated database of literature-supported ligand-receptor interactions in human and mouse
  ☆30Updated 10 months ago
• yqq-chen / CRC_ICB
  ☆29Updated last year
• Teichlab / PanGIAtlas
  Integration of gut cell atlases
  ☆23Updated 2 months ago
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆34Updated 5 years ago
• SunXQlab / scMLnet
  Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks
  ☆26Updated 3 years ago