Teichlab / Pan_fetal_immuneLinks
Collection of scripts for analysis of pan fetal immune atlas
☆27Updated 2 years ago
Alternatives and similar repositories for Pan_fetal_immune
Users that are interested in Pan_fetal_immune are comparing it to the libraries listed below
Sorting:
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated 9 months ago
- R package for pathway analysis in scRNA-seq data☆75Updated 11 months ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆39Updated 3 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆85Updated 2 months ago
- Gene group activity utility functions for Scanpy☆83Updated 7 months ago
- Functional Inference of Gene Regulation☆46Updated last year
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆55Updated 3 months ago
- Integration of gut cell atlases☆27Updated 5 months ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆42Updated 2 years ago
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆31Updated 6 months ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆38Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 8 months ago
- Single cell RNA-seq analysis bundle☆35Updated 5 years ago
- Accurate and fast cell marker gene identification with COSG☆46Updated 4 months ago
- ☆57Updated last year
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆20Updated 3 months ago
- R package for Protein activity analysis of single-cell RNAseq.☆83Updated 2 years ago
- Code repository for the Tumor Immune Cell Atlas (TICA) project☆63Updated 3 years ago
- Single-cell Lung Cancer Atlas with 1.2M cells☆64Updated 6 months ago
- ☆41Updated 4 years ago
- ☆50Updated 5 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆22Updated last year
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- ☆61Updated 6 years ago
- ☆68Updated last year
- Pan-Cancer Single Cell Classifier☆74Updated last year
- scWGCNA☆61Updated 2 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year