MFannot is a program for the annotation of mitochondrial and plastid genomes
☆24Oct 2, 2023Updated 2 years ago
Alternatives and similar repositories for Mfannot
Users that are interested in Mfannot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GRAbB (Genome Region Assembly by Baiting) is a program designed to assemble selected regions of the genome or transcriptome using referen…☆14Nov 6, 2020Updated 5 years ago
- Fungal Genome Mapping Pipeline☆19Jun 9, 2019Updated 7 years ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 3 years ago
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆61Oct 27, 2023Updated 2 years ago
- ☆29Jul 16, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆10Jun 13, 2020Updated 6 years ago
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Feb 26, 2026Updated 4 months ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Jul 26, 2023Updated 2 years ago
- DataColor: Unveiling Biological Data Relationships through Distinctive Color Mapping☆17Nov 23, 2023Updated 2 years ago
- ☆12May 6, 2022Updated 4 years ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆22Feb 21, 2025Updated last year
- MitoDNA extending assembler from NGS data☆23Mar 19, 2026Updated 3 months ago
- a GFA toolkit☆13Oct 4, 2024Updated last year
- chloroplast genome assembly using long reads data☆17Jul 8, 2025Updated 11 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Genome annotation with AUGUSTUS☆335May 30, 2026Updated last month
- Phylo.IO JS tree viewer☆36May 12, 2026Updated last month
- An R package for comparative transcriptomic analyses of hybrids and their progenitors☆17Sep 5, 2024Updated last year
- De Bruijn graph construction for large k.☆17Aug 31, 2021Updated 4 years ago
- A Circos-based tool to visualize genome assembly consistency or synteny between assemblies.☆96Nov 23, 2024Updated last year
- A plant organellar Graphical Fragment Assembly toolkit☆16Sep 10, 2025Updated 9 months ago
- Unzip assembly graphs with Hi-C data and/or long reads.☆28May 7, 2026Updated last month
- ☆17Jun 9, 2025Updated last year
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆464Jun 17, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)☆387Feb 13, 2025Updated last year
- Code repository for the Global Ant Genomics Alliance☆18Jun 16, 2025Updated last year
- Implementation of ToL genome assembly workflows☆32May 11, 2026Updated last month
- Nucmer from Mummer3 followed by ggplot for nicer and more customisable genome alignment plots.☆11Feb 25, 2021Updated 5 years ago
- PLANiTS: a curated sequence reference dataset for plant ITS DNA metabarcoding☆11Mar 31, 2021Updated 5 years ago
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 3 years ago
- Python module to manipulate and visualize minimap2's cs tag☆11Jul 28, 2024Updated last year
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆17Sep 17, 2025Updated 9 months ago
- Bioinformatics scripts for genome analysis☆17Oct 26, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Eukaryotic Genome Annotation Pipeline☆389Updated this week
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆18Nov 29, 2024Updated last year
- This package contains Perl programs/scripts that perform frequently needed operations on FASTA format files.☆16Apr 25, 2025Updated last year
- A chromosomal visualization package for python.☆15Apr 13, 2026Updated 2 months ago
- An ultrafast and memory efficient tool for phylogenomics☆26Apr 17, 2026Updated 2 months ago
- A Rust implementation of sliding window stats over fastas.