BFL-lab / Mfannot

Related projects ⓘ

Alternatives and complementary repositories for Mfannot

• UCSC-LoweLab / tRNAscan-SE
  A program for detection of tRNA genes
  ☆56Updated 2 years ago
• davidemms / SHOOT
  SHOOT.bio - the phylogenetic search engine
  ☆24Updated last year
• xfengnefx / hifiasm-meta
  hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.
  ☆60Updated 2 months ago
• davidemms / STAG
  STAG: Species Tree from All Genes
  ☆31Updated 5 years ago
• ddarriba / prottest3
  Automatically exported from code.google.com/p/prottest3
  ☆34Updated 6 years ago
• evolbioinfo / booster
  ☆27Updated 4 years ago
• gengit / PosiGene
  ☆26Updated 3 years ago
• harta55 / EnTAP
  EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP
  ☆38Updated this week
• rderelle / Broccoli
  orthology assignment using phylogenetic and network analyses
  ☆45Updated last month
• chmccarthy / Pangloss
  Pangenome analysis of eukaryotes.
  ☆18Updated 4 years ago
• uio-cels / NucDiff
  In-depth characterization and annotation of differences between two sets of DNA sequences
  ☆59Updated 4 years ago
• genomeannotation / GAG
  Generates an NCBI .tbl file of annotations on a genome.
  ☆65Updated 6 years ago
• bhattlab / lathe
  A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing
  ☆69Updated 3 years ago
• DessimozLab / FastOMA
  FastOMA is a scalable software package to infer orthology relationship.
  ☆36Updated this week
• Gabaldonlab / perSVade
  perSVade: personalized Structural Variation detection
  ☆37Updated this week
• AliTVTeam / AliTV
  Visualize whole genome alignments as linear maps
  ☆70Updated 2 months ago
• moshi4 / MGCplotter
  Microbial Genome Circular plotting tool for comparative genomics using Circos
  ☆36Updated last year
• PombertLab / SYNY
  The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.
  ☆38Updated 2 weeks ago
• lauguma / GWideCodeML
  A Python package for testing evolutionary hypotheses in genome-wide approaches.
  ☆31Updated 3 years ago
• BeatsonLab-MicrobialGenomics / micropipe
  A pipeline for high-quality bacterial genome construction using ONT sequencing
  ☆38Updated 2 years ago
• jonas-fuchs / varVAMP
  Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.
  ☆33Updated 2 months ago
• kjenike / panagram
  ☆60Updated last month
• mourisl / Rcorrector
  Error correction for Illumina RNA-seq reads
  ☆63Updated 8 months ago
• koadman / mauve
  A genome alignment and visualization system
  ☆25Updated 4 years ago
• Adamtaranto / teloclip
  A tool for the recovery of unassembled telomeres from soft-clipped read alignments.
  ☆35Updated last week
• mourisl / centrifuger
  Classifier for metagenomic sequences using FM-index with run-block compressed BWT.
  ☆51Updated this week
• josuebarrera / GenEra
  genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.
  ☆46Updated 3 weeks ago
• Stephane-S / Simplot_PlusPlus
  ☆31Updated last year
• ibest / ARC
  Assembly by Reduced Complexity (ARC)
  ☆41Updated 8 years ago
• steineggerlab / conterminator
  Detection of incorrectly labeled sequences across kingdoms
  ☆80Updated 2 years ago