ddarriba / prottest3
Automatically exported from code.google.com/p/prottest3
☆34Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for prottest3
- Generates an NCBI .tbl file of annotations on a genome.☆64Updated 6 years ago
- ☆42Updated 7 years ago
- Synteny Imager☆60Updated 2 months ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆56Updated last year
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆50Updated last year
- ☆69Updated last month
- finshingTool☆54Updated 7 years ago
- Genome Annotation Without Nightmares☆43Updated last year
- Tools for working with second gen assemblies, fasta sequences, etc☆92Updated 8 years ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆67Updated 3 years ago
- Automated de novo assembly of whole chloroplast genomes.☆44Updated last month
- STAG: Species Tree from All Genes☆31Updated 5 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆56Updated 3 years ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 5 months ago
- Conditional Reciprocal Best Blast☆40Updated 7 years ago
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆37Updated 4 years ago
- A shiny application to visualize MCscan result☆33Updated 2 years ago
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆31Updated 11 months ago
- A program for detection of tRNA genes☆56Updated last year
- paml documentation and tutorials☆45Updated last year
- ☆57Updated 3 weeks ago
- web documentation for Trinotate☆48Updated last year
- A Circos-based tool to visualize genome assembly consistency or synteny between assemblies.☆68Updated last week
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆59Updated 3 years ago
- meta-pipeline for repetitive element de-fragmentation and annotation☆24Updated 4 years ago
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆32Updated 8 months ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆74Updated 8 years ago
- ☆27Updated 4 years ago
- Transcripts annotation and GO enrichment Fisher tests☆25Updated last year