☆16Feb 11, 2024Updated 2 years ago
Alternatives and similar repositories for lisa
Users that are interested in lisa are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆33Nov 9, 2022Updated 3 years ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆68Jul 8, 2025Updated 10 months ago
- epigenome analysis to rank transcription factors☆33Feb 2, 2023Updated 3 years ago
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆21May 24, 2021Updated 5 years ago
- ChIP-seq DC and QC Pipeline☆36Mar 19, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Provides classes for working with sets☆11Dec 19, 2025Updated 5 months ago
- Dynamical systems methods for RNA velocity analysis☆24May 19, 2021Updated 5 years ago
- Documentations and Tutorials of Gosling.js☆12Sep 13, 2021Updated 4 years ago
- Single-cell Transcriptome and Regulome Analysis Pipeline☆310Mar 6, 2023Updated 3 years ago
- ggplot to loon☆28Jun 12, 2025Updated 11 months ago
- Pipeline for generating RNAseq-based cancer patient reports☆12Updated this week
- TreeExp 2.0: Toolbox for analyzing expression evolution based on RNA-seq count data☆15Jul 12, 2019Updated 6 years ago
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆44Mar 13, 2026Updated 2 months ago
- RNA-seq analysis scripts☆17Jan 8, 2026Updated 4 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A set of tools for accurate quantitation of single-cell allele-specific expression☆13Dec 26, 2022Updated 3 years ago
- ☆62Jun 17, 2021Updated 4 years ago
- Scatterbar - data visualization for proportional data across many spatially resolved coordinates☆11Mar 3, 2025Updated last year
- Repository for signature genes from Immune Cell Atlas☆20Sep 25, 2019Updated 6 years ago
- Rep-Seq data analysis tutorial☆12Dec 6, 2017Updated 8 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- ☆18May 15, 2025Updated last year
- R implementation of the BAGEL method to call for gene essentiality significance☆11May 1, 2018Updated 8 years ago
- sort genomic data☆36Nov 7, 2025Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Aug 17, 2021Updated 4 years ago
- syncmer graphs, and perhaps other sorts of sequence graphs☆36Apr 1, 2026Updated last month
- Tumor Immune Single-cell Hub☆23Aug 13, 2020Updated 5 years ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆17Dec 28, 2022Updated 3 years ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21May 22, 2023Updated 3 years ago
- Scoring GT/AG sites for improving spliced alignment☆52Nov 10, 2025Updated 6 months ago
- Imputing dropout events in single-cell RNA-sequencing data☆18Dec 7, 2020Updated 5 years ago
- ☆19Apr 20, 2025Updated last year
- Scraper for MyFitnessPal.com food and exercise diary☆15Sep 17, 2017Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Reusable tools for working with next-generation sequencing (NGS) data☆12Oct 7, 2024Updated last year
- commandline manipulation of genomic variants and NGS reads☆19Sep 6, 2024Updated last year
- UVC, a very accurate small-variant caller (https://doi.org/10.1093/bib/bbab458)☆14May 18, 2025Updated last year
- a tool for summarizing and integrating gene-set analysis results☆16Aug 14, 2024Updated last year
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Dec 18, 2023Updated 2 years ago
- Geometry-preserving random sampling☆96Oct 29, 2024Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆30Oct 15, 2020Updated 5 years ago