processes GoT amplicon data and generates a table of metrics
☆32Jun 24, 2022Updated 4 years ago
Alternatives and similar repositories for IronThrone-GoT
Users that are interested in IronThrone-GoT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Supplementary data for Petti, et al 2019 scRNA mutation publication☆16Feb 1, 2023Updated 3 years ago
- mapping somatic variants to cell barcodes in scRNA-Seq data☆11Sep 21, 2026Updated last month
- single cell recurrence based variant analysis☆12Dec 13, 2022Updated 3 years ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆24Jan 16, 2024Updated 2 years ago
- Post hoc cell type classification of single-cell RNA-sequencing data.☆11Oct 5, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆27Oct 17, 2024Updated 2 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆22Jan 15, 2023Updated 3 years ago
- ☆14Jul 18, 2025Updated last year
- Haplotype and population structure inference using neural networks.☆30Dec 5, 2024Updated last year
- Single cell atlas of the hearts of patients with dilated cardiomyopathy☆13Sep 7, 2023Updated 3 years ago
- Repository for the Anczukow-Lab splicing pipeline☆17Mar 17, 2025Updated last year
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆39Nov 27, 2024Updated last year
- ☆13Jan 6, 2021Updated 5 years ago
- LongSom tool for long-reads☆13May 20, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Genome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed …☆57Updated this week
- mutation(barcode) caller for 10x single cell data☆44Jun 14, 2020Updated 6 years ago
- The fantabulous HMM compiler☆11Oct 18, 2026Updated last week
- ☆11Feb 16, 2021Updated 5 years ago
- Iteratively Adjusted Surrogate Variable Analysis☆10Aug 23, 2021Updated 5 years ago
- A sensitive and fast tool for circular RNA detection from RNA-Seq data☆11May 4, 2021Updated 5 years ago
- ☆15Feb 28, 2022Updated 4 years ago
- ☆12Aug 8, 2024Updated 2 years ago
- Visualize coverage, canonical, and backsplice junctions.☆12Aug 17, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- a variational autoencoder method for clustering single-cell mutation data☆11Apr 17, 2024Updated 2 years ago
- ☆29Sep 23, 2019Updated 7 years ago
- Shimmer is a software package for the characterization of genetic differences between two very similar samples, e.g., a tumor sample and …☆12Jan 12, 2023Updated 3 years ago
- ☆11Feb 9, 2024Updated 2 years ago
- ☆10Oct 7, 2024Updated 2 years ago
- MrMosaic (Genomic Mosaic Structural Variant Caller)☆15Jul 21, 2017Updated 9 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆14Nov 12, 2019Updated 6 years ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆17Jul 13, 2026Updated 3 months ago
- ☆10Aug 28, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A high-performance R package for single-cell genomics☆22Oct 5, 2026Updated 3 weeks ago
- fast classification of metagenomic sequences with lightweight de Bruijin graph-based reference indexing☆10Mar 7, 2023Updated 3 years ago
- GWAS genetics Fine-mapping method☆29Jun 11, 2026Updated 4 months ago
- ☆24May 1, 2026Updated 5 months ago
- scSNV Mapping tool for 10X Single Cell Data☆26Dec 19, 2025Updated 10 months ago
- Analyze exome data for Mendelian disorders. Still in alpha-testing.☆10Apr 13, 2016Updated 10 years ago
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆23Jul 28, 2025Updated last year