dan-landau / IronThrone-GoTView external linksLinks
processes GoT amplicon data and generates a table of metrics
☆32Jun 24, 2022Updated 3 years ago
Alternatives and similar repositories for IronThrone-GoT
Users that are interested in IronThrone-GoT are comparing it to the libraries listed below
Sorting:
- Supplementary data for Petti, et al 2019 scRNA mutation publication☆16Feb 1, 2023Updated 3 years ago
- Post hoc cell type classification of single-cell RNA-sequencing data.☆10Oct 5, 2021Updated 4 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆13Nov 12, 2019Updated 6 years ago
- ☆11Jul 18, 2025Updated 6 months ago
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆35Nov 27, 2024Updated last year
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆24Jan 16, 2024Updated 2 years ago
- ☆15Feb 28, 2022Updated 3 years ago
- Repository for the Anczukow-Lab splicing pipeline☆17Mar 17, 2025Updated 10 months ago
- Haplotype and population structure inference using neural networks.☆28Dec 5, 2024Updated last year
- Calculates the Variant Allele Fraction of variants in VCF files☆19Nov 28, 2024Updated last year
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆17Aug 12, 2022Updated 3 years ago
- FRACTAL: framework for distributed computing to trace large accurate lineages☆24Sep 6, 2022Updated 3 years ago
- H3ABioNet 16S rDNA diverstity analysis package☆19May 20, 2019Updated 6 years ago
- Flexible Bayesian inference of mutational signatures☆41Jan 30, 2023Updated 3 years ago
- ☆10May 31, 2022Updated 3 years ago
- ☆23Nov 9, 2025Updated 3 months ago
- Pipeline for analyzing rare mutations in metagenome-assembled genomes☆10Apr 4, 2025Updated 10 months ago
- LongSom tool for long-reads☆11May 20, 2025Updated 8 months ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Oct 17, 2025Updated 4 months ago
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆11Aug 2, 2023Updated 2 years ago
- GWAS genetics Fine-mapping method☆26Oct 16, 2024Updated last year
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Oct 9, 2020Updated 5 years ago
- ☆11Feb 16, 2021Updated 5 years ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Jul 8, 2025Updated 7 months ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Jun 17, 2024Updated last year
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- Pathway visualization and analysis tool for Pathway Commons and other BioPAX data☆14May 25, 2022Updated 3 years ago
- R Package for phasing of single cell Strand-seq data☆10Jan 14, 2025Updated last year
- Post variant-calling QC pipeline for orienting cohort data with a reference file. Additional steps for merging and phasing with a referen…☆11Jun 10, 2019Updated 6 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Oct 15, 2025Updated 4 months ago
- Mutational Signature Comprehensive Analysis Toolkit☆15Aug 22, 2025Updated 5 months ago
- Integrated Genome Modeling (IGM): multi-modal data-driven simulator of genome structures☆12Jun 15, 2023Updated 2 years ago
- Whole genome workflows☆12Nov 9, 2024Updated last year
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Oct 17, 2024Updated last year
- A python package for showing JBrowse views☆26Jan 3, 2024Updated 2 years ago
- Molecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level☆14Jul 10, 2024Updated last year
- Variant impact phenotyping using Perturb-seq☆10Apr 22, 2024Updated last year
- DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…☆14May 7, 2024Updated last year
- ☆14Oct 9, 2025Updated 4 months ago