23andMe / yhaploLinks
Identifying Y-chromosome haplogroups in arbitrarily large samples of sequenced or genotyped men
☆111Updated 3 weeks ago
Alternatives and similar repositories for yhaplo
Users that are interested in yhaplo are comparing it to the libraries listed below
Sorting:
- Browser for ExAC consortium data☆106Updated 3 years ago
- Tools test whether admixture occurred and more☆210Updated last year
- Scalable gVCF merging and joint variant calling for population sequencing projects☆171Updated last year
- a toolkit for working with Oxford nanopore data☆245Updated 2 years ago
- Easy access to human reference genome sequences☆56Updated 2 years ago
- an admixture analysis tool for Python that supports raw data from 23andme, AncestryDNA, etc.☆71Updated 3 years ago
- NGS Language Bindings☆119Updated last year
- Yleaf software for human Y-chromosomal haplogroup inference from next generation sequencing data☆29Updated 7 months ago
- de novo sequence assembler using string graphs☆240Updated 6 years ago
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆75Updated last month
- A genotype query interface.☆136Updated 4 years ago
- Small utilities for working with fastq sequence files.☆123Updated 3 years ago
- miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.☆182Updated 6 years ago
- web-based analysis tool for rare disease genomics☆195Updated this week
- GenomeWarp translates genetic variants from one genome assembly version to another.☆97Updated 2 years ago
- A tool set for short variant discovery in genetic sequence data.☆202Updated 4 years ago
- This repo is DEPRECATED. Please use minimap2, the successor of minimap.☆106Updated 8 years ago
- Models and APIs for Genomic data. RETIRED 2018-01-24☆219Updated 3 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆98Updated 7 years ago
- De novo assembly based variant calling pipeline for Illumina short reads☆109Updated 4 years ago
- Flexible genotype query among 30,000+ samples whole-genome☆94Updated 6 years ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆101Updated 2 years ago
- genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF☆144Updated 3 months ago
- HGVS variant name parsing and generation☆175Updated 2 years ago
- GenomeTools genome analysis system.☆325Updated 3 weeks ago
- Whole Genome Simulator for Next-Generation Sequencing☆101Updated 10 months ago
- Official code repository for GATK versions 1.0 through 3.7 (full licensed package). For GATK 4 code, see the https://github.com/broadinst…☆143Updated 7 years ago
- GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/n…☆181Updated 6 years ago
- Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)☆86Updated 8 years ago
- convert your 23andme raw file to VCF | DEPRECATED, please see https://github.com/plantimals/2vcf☆98Updated 6 years ago