Command line tools for CMDB varaints browser
☆23May 14, 2024Updated 2 years ago
Alternatives and similar repositories for cmdbtools
Users that are interested in cmdbtools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Genomics data visualization in Python by using matplotlib.☆69Dec 27, 2023Updated 2 years ago
- Expanded STR algorithm for Illumina sequencing data☆23Sep 11, 2022Updated 3 years ago
- Generate unique KMERs for every contig in a FASTA file☆49Aug 17, 2022Updated 3 years ago
- 肿瘤突变负荷学习笔记（tumor mutation burden）☆16Dec 10, 2019Updated 6 years ago
- PharmGKB NGS Pipeline☆19Oct 2, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Fast and scalable variant annotation tool☆30May 1, 2022Updated 4 years ago
- This is a core roll for Rocks☆20Mar 23, 2023Updated 3 years ago
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆23Feb 20, 2026Updated 3 months ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆28Aug 16, 2023Updated 2 years ago
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 5 years ago
- ☆13Apr 5, 2024Updated 2 years ago
- Adaptive haplotype assembly for efficiently leveraging high coverage in long reads☆13Sep 4, 2018Updated 7 years ago
- Code associated with 2019 manuscript entitled "Transcript expression-aware annotation improves rare variant discovery and interpretation…☆34May 5, 2022Updated 4 years ago
- An unbiased method for genome-wide CBE off-targets assessment☆13Mar 9, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Probabilistic HLA typing☆35Aug 31, 2019Updated 6 years ago
- A high performance and compression ratio compressor for genomic data, powered by GTXLab of Genetalks.☆170Apr 18, 2022Updated 4 years ago
- Somatic point mutation caller☆17Jul 8, 2016Updated 9 years ago
- Phenotype driven gene prioritization for HPO☆51Jul 26, 2021Updated 4 years ago
- Deduplication for cfDNA sequencing data☆11Jul 5, 2017Updated 8 years ago
- NIPT-human-genetics is a semi-automated workflow designed for the analysis of large-scale ultra-low-pass non-invasive prenatal test (NIPT…☆12Sep 22, 2025Updated 7 months ago
- CMOD Wikidata App built on Django Framework for editing Wikidata with existing GeneWIki bot code☆12Feb 3, 2017Updated 9 years ago
- Location of public benchmarking; primarily final results☆18Feb 17, 2025Updated last year
- LIkelihood Ratio Interpretation of Clinical AbnormaLities☆42Apr 9, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A new web-based HTML5 genome browser. Genome Maps can also browse BAM and VCFs files among other formats.☆27Sep 24, 2013Updated 12 years ago
- Analysis of antibody NGS data☆13Mar 19, 2026Updated 2 months ago
- Code used to generate the results in "Somatic chronology of treatment-resistant prostate cancer via deep whole-genome ctDNA sequencing"☆16Mar 11, 2024Updated 2 years ago
- A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.☆50Dec 27, 2023Updated 2 years ago
- ☆15Sep 27, 2022Updated 3 years ago
- Multiple sequence aligner for protein and DNA/RNA.☆26Jan 3, 2018Updated 8 years ago
- Code required to reproduce analysis of the single cell Cut and Tag data in the resource paper (Bartosovic et. al., 2020)☆14Apr 2, 2026Updated last month
- Multiplex Primer Design☆12May 3, 2020Updated 6 years ago
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆16May 21, 2014Updated 12 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Jun 30, 2023Updated 2 years ago
- BAMixChecker: A fast and efficient tool for sample matching checkup☆16Jun 12, 2022Updated 3 years ago
- Sequence to Medical Phenotypes: A pipeline featuring variant annotation, prioritization, pharmacogenomics, and tools for analyzing genomi…☆13Mar 1, 2016Updated 10 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆24Feb 17, 2023Updated 3 years ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆17Nov 7, 2025Updated 6 months ago
- Visualization of multiple tandem mass spectrometry data☆10Jun 15, 2020Updated 5 years ago
- An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infect…☆120Oct 27, 2023Updated 2 years ago