Easy access to human reference genome sequences
☆58Apr 6, 2023Updated 2 years ago
Alternatives and similar repositories for seqseek
Users that are interested in seqseek are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Identifying Y-chromosome haplogroups in arbitrarily large samples of sequenced or genotyped men☆122Feb 6, 2026Updated last month
- An example Python app on 23andMe's genome API using the flask microframework.☆71May 22, 2023Updated 2 years ago
- convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations☆60Sep 16, 2019Updated 6 years ago
- tools for reading, writing, generating, merging, and remapping SNPs☆113Jan 28, 2026Updated last month
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆13Nov 12, 2019Updated 6 years ago
- amplicon/smMIP mapping and analysis pipeline☆11Dec 8, 2022Updated 3 years ago
- A Node.js/Express app built on 23andMe's API, checking an ACVR1B mutation for higher muscle strength.☆29Mar 26, 2024Updated last year
- haplotypes genotypes and alleles example decision synthesizer☆20Jun 13, 2019Updated 6 years ago
- convert your 23andme raw file to VCF | DEPRECATED, please see https://github.com/plantimals/2vcf☆100Aug 27, 2019Updated 6 years ago
- tools for analyzing and exploring genetic relationships☆173Jan 28, 2026Updated last month
- ☆17Mar 21, 2023Updated 3 years ago
- an admixture analysis tool for Python that supports raw data from 23andme, AncestryDNA, etc.☆74Aug 22, 2022Updated 3 years ago
- UVC, a very accurate small-variant caller (https://doi.org/10.1093/bib/bbab458)☆14May 18, 2025Updated 10 months ago
- Obsolete/Legacy GATK repository -- go to https://github.com/broadinstitute/gatk instead☆32Aug 16, 2017Updated 8 years ago
- Variational Bayes for discrete undirected models☆11Aug 7, 2017Updated 8 years ago
- ☆16Jun 11, 2017Updated 8 years ago
- Gene Fusion Visualiser☆52Jan 15, 2023Updated 3 years ago
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets☆38Jul 30, 2020Updated 5 years ago
- Genomics data visualization in Python by using matplotlib.☆69Dec 27, 2023Updated 2 years ago
- Make interactive LocusZoom plots from a local GWAS file☆10May 9, 2025Updated 10 months ago
- An RNA pipeline built on top of ADAM. Apache 2 licensed.☆19Jan 19, 2018Updated 8 years ago
- Visualization and charting JS library for streaming genomic data☆19Dec 4, 2024Updated last year
- python module to help explore raw data from 23andMe☆49Jan 11, 2016Updated 10 years ago
- ☆13Aug 20, 2025Updated 7 months ago
- Theano-based Deep Learning library (convnets, recurrent neural networks, and more).☆14Aug 2, 2017Updated 8 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆39Feb 23, 2026Updated last month
- A secure encryption tool for genomic data☆63Apr 14, 2024Updated last year
- phy-mer☆11Oct 12, 2017Updated 8 years ago
- Materials related to my talk "Pat Helland and Me"☆14Dec 24, 2019Updated 6 years ago
- Finding cryptic relationships to boost disease gene detection☆12May 31, 2023Updated 2 years ago
- Probabilistic HLA typing☆35Aug 31, 2019Updated 6 years ago
- Calculate indel trajectory likelihoods using methods of Miklós, Lunter & Holmes (2004), De Maio (2020), and Holmes (2020)☆14Sep 17, 2022Updated 3 years ago
- GenoTypes Compressor☆16May 19, 2022Updated 3 years ago
- Program for estimating admixture proportions and doing principal component analysis of a single NGS sample☆11Aug 15, 2024Updated last year
- PopSTR - A Population based microsatellite genotyper☆32Oct 23, 2023Updated 2 years ago
- Applying polygenic scores (PGS) on imputed genotypes☆32Oct 28, 2025Updated 4 months ago
- ☆14Oct 14, 2020Updated 5 years ago
- Machine learning pipeline for meta-prediction of coronary artery disease☆17Apr 16, 2025Updated 11 months ago
- Code to reproduce analyses from the sleuth paper☆16Nov 20, 2018Updated 7 years ago