zunderlab / FLOWMAPView external linksLinks
☆25Sep 2, 2024Updated last year
Alternatives and similar repositories for FLOWMAP
Users that are interested in FLOWMAP are comparing it to the libraries listed below
Sorting:
- Gene Expression Decomposition and Integration☆19Updated this week
- Correlation-based approach for identification of endocrine interactions☆13Jan 18, 2022Updated 4 years ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆18Nov 18, 2025Updated 2 months ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 3 years ago
- A Toolkit for Construct Tree-shaped Trajectory for Flow and Mass Cytometry data☆28Nov 8, 2020Updated 5 years ago
- R package for generalized binary covariance decomposition.☆14Jul 13, 2025Updated 7 months ago
- Finding the causality in biological pathways☆14Jul 12, 2023Updated 2 years ago
- Peak-based selection of high quality cytometry data☆20Jan 12, 2026Updated last month
- PAFit source☆17Mar 28, 2024Updated last year
- ImmuCellAI (Immune Cell Abundance Identifier) is a tool to estimate the abundance of 24 immune cells from gene expression dataset includi…☆15May 25, 2025Updated 8 months ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated 7 months ago
- an R package for deep mining gene co-expression networks in multi-trait expression data☆21Jan 23, 2026Updated 3 weeks ago
- scaffold☆18Aug 13, 2018Updated 7 years ago
- ☆20Jul 16, 2024Updated last year
- ☆19Jul 17, 2024Updated last year
- Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments☆19Aug 12, 2025Updated 6 months ago
- Single-Cell Inference of Class Switch Recombination☆20Updated this week
- SIMBA: SIngle-cell eMBedding Along with features☆20Jan 6, 2026Updated last month
- Network construction Algorithm☆22Sep 5, 2024Updated last year
- R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …☆23Oct 3, 2023Updated 2 years ago
- Mapping Alternative Splicing Events to pRoteins☆21Feb 8, 2022Updated 4 years ago
- ☆21Apr 10, 2025Updated 10 months ago
- CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration☆54Oct 31, 2024Updated last year
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47May 3, 2023Updated 2 years ago
- Landscape Single Cell Entropy☆21Aug 24, 2020Updated 5 years ago
- domain adaptation of spatial and single-cell transcriptome☆28Sep 21, 2024Updated last year
- An Interpretable Self-Attention Network with block-attention and attention-attribution.☆12Sep 22, 2023Updated 2 years ago
- ☆30May 4, 2025Updated 9 months ago
- Count kmers with a more efficient (faster) hash table☆23Jun 8, 2024Updated last year
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Mar 7, 2025Updated 11 months ago
- MetaTiME: Meta-components in Tumor immune MicroEnvironment☆137Aug 11, 2023Updated 2 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆81Aug 10, 2025Updated 6 months ago
- Significance analysis for clustering single-cell RNA-sequencing data☆123Sep 7, 2024Updated last year
- FlowSOM algorithm in Python, using self-organizing maps and minimum spanning tree for visualization and interpretation of cytometry data☆34Jun 16, 2022Updated 3 years ago
- ☆36Mar 8, 2025Updated 11 months ago
- ☆38Mar 24, 2023Updated 2 years ago
- An R framework for choosing clustering parameters in scRNA-seq analysis pipelines☆36Jun 12, 2020Updated 5 years ago
- A repository for neural representational learning of RNA secondary structures☆32Feb 13, 2020Updated 6 years ago
- Fast covariance, correlation, and cosine similarity.☆37Nov 23, 2021Updated 4 years ago