wooyongc / Benisse
☆17Updated 10 months ago
Alternatives and similar repositories for Benisse
Users that are interested in Benisse are comparing it to the libraries listed below
Sorting:
- ☆20Updated last year
- Pipeline for Universal Mapping of ATAC-seq☆25Updated last year
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago
- ☆49Updated 9 months ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆33Updated 3 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- RAGE-seq scripts☆18Updated 3 years ago
- ☆31Updated 3 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆42Updated last year
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆19Updated last year
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 6 months ago
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆20Updated 6 months ago
- ☆29Updated 2 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- ☆34Updated 2 years ago
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆10Updated last year
- Inferring gene co-expression networks from single cell gene expression data☆24Updated 2 years ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆37Updated last year
- ☆30Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆25Updated 3 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆30Updated 3 years ago
- Using BCR and expression for sequence embedding☆21Updated last month
- scover☆23Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- A tissue-specific single-cell biological age model☆11Updated last year
- Information-based dimensionality reduction☆29Updated 5 months ago
- Integrative analysis for scTCR- and scRNA-seq data☆16Updated last month
- Single-cell Case Control Analysis☆48Updated 6 months ago