hzc363 / DeepLearningCyTOF
☆38Updated last year
Alternatives and similar repositories for DeepLearningCyTOF:
Users that are interested in DeepLearningCyTOF are comparing it to the libraries listed below
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆57Updated 4 years ago
- R package for Pathway RespOnsive GENe activity inference☆98Updated 2 years ago
- R package for pre-processing of mass and flow cytometry data☆43Updated 2 years ago
- R library to normalize cytometry data☆33Updated 3 months ago
- ☆61Updated 3 years ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆79Updated last year
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆116Updated 5 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated last year
- marker-based purification of cell types from single-cell RNA-seq datasets☆100Updated 7 months ago
- Explore and share your scRNAseq clustering results☆48Updated last year
- ☆51Updated last year
- R package for the analysis of single-cell immune repertoires☆41Updated last month
- Single-Cell Clustering Assessment Framework☆97Updated last year
- Cytometry dATa anALYsis Tools☆67Updated 2 months ago
- A unified interface to spatial transcriptomics deconvolution tools☆40Updated 3 weeks ago
- ☆56Updated 2 years ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆75Updated last year
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆81Updated 4 months ago
- CellNet: network biology applied to stem cell engineering☆53Updated last year
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- ConsensusTME Gene Sets and R Script☆39Updated 7 months ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated 11 months ago
- R implementation of MULTI-seq sample classification workflow☆61Updated last year
- Pan-Cancer Single Cell Classifier☆63Updated 8 months ago
- Zhang, et al, Nature Immunology, 2019. Use single-cell transcriptomics and proteomics to study autoimmune diseases.☆19Updated 4 years ago
- ☆57Updated 3 years ago
- Immunology-related bioinformatics data and tools☆71Updated 9 months ago
- R Package for Single-Cell Dataset Processing and Visualization☆61Updated 3 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- Cell type pipes for R☆51Updated last year