mcgilldinglab / UNAGILinks
Unagi: Deep Generative Model for Deciphering Cellular Dynamics and In-Silico Drug Discovery in Complex Diseases.
☆41Updated last week
Alternatives and similar repositories for UNAGI
Users that are interested in UNAGI are comparing it to the libraries listed below
Sorting:
- ☆44Updated last year
- Gene group activity utility functions for Scanpy☆94Updated 10 months ago
- ☆54Updated last month
- ☆39Updated 4 months ago
- ☆30Updated 3 months ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆25Updated 4 months ago
- Predict RNA velocity through deep learning☆70Updated last year
- Single cell omics biology annotations☆51Updated 6 months ago
- ☆31Updated 3 years ago
- ☆45Updated last year
- ☆59Updated 4 months ago
- code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm.…☆13Updated 9 months ago
- ☆55Updated last year
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆107Updated last month
- R implementation of GeneTrajectory☆65Updated last year
- ☆117Updated 5 months ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 9 months ago
- Whole mouse brain snATAC seq analysis☆27Updated 6 months ago
- ☆83Updated last week
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆42Updated 2 months ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆65Updated 3 months ago
- Highly specific clustering of T cell receptor CDR3s☆43Updated 3 years ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- Single-Cell Inference of Class Switch Recombination☆19Updated last month
- Single-cell Lung Cancer Atlas with 1.2M cells☆69Updated 9 months ago
- Unified access to several second-generation deconvolution methods☆84Updated 3 weeks ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- ☆18Updated last year
- Code for the paper "MetaQ: fast, scalable and accurate metacell inference via deep single-cell quantization"☆17Updated 10 months ago
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated last month