mcgilldinglab / UNAGILinks
UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.
☆50Updated 3 weeks ago
Alternatives and similar repositories for UNAGI
Users that are interested in UNAGI are comparing it to the libraries listed below
Sorting:
- ☆60Updated this week
- ☆45Updated 2 years ago
- ☆27Updated last year
- Gene group activity utility functions for Scanpy☆100Updated last year
- Predict RNA velocity through deep learning☆72Updated 2 years ago
- ☆47Updated last year
- Single cell omics biology annotations☆53Updated 9 months ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆26Updated 8 months ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆114Updated 4 months ago
- ☆56Updated last year
- ☆32Updated 6 months ago
- code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm.…☆13Updated last year
- ☆41Updated 7 months ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated 2 years ago
- ☆125Updated last week
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆50Updated 6 months ago
- Ultrafast TCR clustering algorithm based on geometric isometry☆73Updated last year
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆43Updated 11 months ago
- R implementation of GeneTrajectory☆68Updated last year
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆59Updated last year
- ☆97Updated 5 months ago
- SPROD: Spatial expression profiling de-noising☆36Updated 2 years ago
- Single-cell Lung Cancer Atlas with 1.2M cells☆87Updated last year
- ☆62Updated 2 months ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆27Updated last year
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated 4 months ago
- ACTIONet single-cell analysis framework☆44Updated last year
- A tool for semi-automatic cell type harmonization and integration☆118Updated 3 months ago
- A modular framework for multimodal cross-cell-type transcriptional regulation models☆101Updated this week
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated last year