yuifu / millefyLinks
Millefy: Genome browser-like visualization of single-cell RNA-seq dataset
☆29Updated 5 years ago
Alternatives and similar repositories for millefy
Users that are interested in millefy are comparing it to the libraries listed below
Sorting:
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- processes GoT amplicon data and generates a table of metrics☆30Updated 3 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 11 months ago
- Differential ATAC-seq toolkit☆27Updated last year
- binned motif enrichment analysis and visualisation☆40Updated 2 weeks ago
- A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.☆34Updated 3 years ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆29Updated 3 months ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆37Updated last year
- Bead-based single-cell atac processing☆33Updated 3 years ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- ChIP-seq DC and QC Pipeline☆34Updated 4 years ago
- Snakemake pipeline for running MAJIQ☆23Updated last year
- iread☆25Updated 3 years ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- Create QC and summary reports for Alevin output☆32Updated 2 months ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- simplified cellranger for long-read data☆19Updated 2 months ago
- interactive plots for differential expression analysis☆32Updated 3 weeks ago
- R package to analyze aberrant splicing junctions in tumor samples to identify neoepitopes☆14Updated 3 months ago
- Next-Gen Sequencing tools from the Horvath Lab☆44Updated this week
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 2 years ago
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- ☆22Updated 4 months ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆28Updated 3 years ago