yuifu / millefyLinks
Millefy: Genome browser-like visualization of single-cell RNA-seq dataset
☆29Updated 5 years ago
Alternatives and similar repositories for millefy
Users that are interested in millefy are comparing it to the libraries listed below
Sorting:
- A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.☆34Updated 3 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆29Updated 3 months ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆28Updated 3 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- processes GoT amplicon data and generates a table of metrics☆30Updated 3 years ago
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆28Updated 2 years ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- interactive plots for differential expression analysis☆32Updated this week
- Bead-based single-cell atac processing☆33Updated 3 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆34Updated 6 months ago
- binned motif enrichment analysis and visualisation☆40Updated last month
- ChIP-seq DC and QC Pipeline☆34Updated 4 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆37Updated last year
- simplified cellranger for long-read data☆19Updated 2 months ago
- A toolkit for working with ATAC-seq data.☆24Updated last year
- Comprehensive Human Expressed SequenceS☆17Updated 10 months ago
- Snakemake pipeline for microexon discovery and quantification☆20Updated 5 months ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- ☆22Updated 4 months ago
- RNA-seq workflow: differential transcript usage☆21Updated last year
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆21Updated 8 years ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Updated last year