yuifu / millefyLinks
Millefy: Genome browser-like visualization of single-cell RNA-seq dataset
☆29Updated 5 years ago
Alternatives and similar repositories for millefy
Users that are interested in millefy are comparing it to the libraries listed below
Sorting:
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Differential ATAC-seq toolkit☆27Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆30Updated 8 months ago
- A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.☆36Updated 3 years ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆41Updated last year
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆23Updated 9 years ago
- interactive plots for differential expression analysis☆34Updated 5 months ago
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆29Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 5 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Updated last month
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆29Updated 4 years ago
- ☆23Updated 9 months ago
- ☆34Updated 3 weeks ago
- binned motif enrichment analysis and visualisation☆43Updated last month
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆45Updated 3 years ago
- Visualization tool for temporal clonal evolution.☆18Updated 5 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 3 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆54Updated last month
- iread☆25Updated 4 years ago
- Snakemake pipeline for running MAJIQ☆23Updated last year
- DriverPower☆26Updated 10 months ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Updated 2 months ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- R package for reading in & working with NucleoATAC outputs☆26Updated 7 years ago