hakyimlab / gtex-gwas-analysis
☆22Updated 3 years ago
Alternatives and similar repositories for gtex-gwas-analysis:
Users that are interested in gtex-gwas-analysis are comparing it to the libraries listed below
- Mediated Expression Score Regression (MESC)☆26Updated 2 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 5 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- QTL Discovery using Annotations☆24Updated 2 years ago
- TWAS-pipeline☆22Updated 4 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 5 months ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- ☆20Updated 10 months ago
- Colocalization analysis of genetic association signals☆52Updated 5 months ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Quality control steps for GWAS☆21Updated last year
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 10 months ago
- ☆15Updated 4 years ago
- Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types☆30Updated 3 years ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- software package for integrative genetic association analysis☆34Updated last year
- ☆32Updated last year
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆11Updated last month
- Regional association plots☆25Updated last year
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆17Updated 2 years ago
- ☆35Updated 4 years ago
- Pan-transcriptomic phenotyping☆17Updated last week
- ☆21Updated last month
- ☆46Updated 6 months ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆43Updated 2 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- Manhattan++☆28Updated last year
- ☆21Updated 3 months ago
- Code for implementing Mendelian randomization investigations☆17Updated 9 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago