Alternatives and similar repositories for mr-code

Users that are interested in mr-code are comparing it to the libraries listed below

• yanglab-emory / TIGAR
  ☆22Updated 3 weeks ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆27Updated 3 months ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆48Updated 2 years ago
• WenjianBI / SPACox
  GWAS for survival analysis in large cohorts
  ☆22Updated last year
• tobyjohnson / gtx
  Genetics ToolboX R package
  ☆32Updated 5 years ago
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆16Updated 4 years ago
• thewonlab / H-MAGMA
  ☆35Updated 2 years ago
• clagiamba / moloc
  ☆38Updated 5 years ago
• Kyoko-wtnb / FUMA_scRNA_data
  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
  ☆24Updated 6 years ago
• jrs95 / gassocplot2
  Regional association plots
  ☆24Updated last year
• MRC-Epid / pGWAS_discovery
  Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"
  ☆27Updated 4 years ago
• xqwen / dap
  software package for integrative genetic association analysis
  ☆35Updated 2 years ago
• immunogenomics / cov-ldsc
  ☆11Updated 3 years ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆42Updated 7 years ago
• jrs95 / gassocplot
  Regional association plots
  ☆26Updated last year
• hakyimlab / gtex-gwas-analysis
  ☆24Updated 4 years ago
• single-cell-genetics / limix_qtl
  ☆20Updated 6 months ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆53Updated 7 months ago
• StatFunGen / pecotmr
  Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆31Updated this week
• dcalderon / rolypoly
  Method for identifying trait-relevant gene annotations from GWAS summary statistics.
  ☆18Updated 3 years ago
• MRCIEU / PhenoSpD
  ☆18Updated 8 years ago
• bogdanlab / RHOGE
  Estimate genetic correlation using predicted expression
  ☆24Updated 7 years ago
• lcrawlab / i-LDSC
  Code and simulations using interaction-LD score regression
  ☆13Updated last year
• RajLabMSSM / catalogueR
  Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).
  ☆14Updated 3 years ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆35Updated 5 years ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆28Updated 3 years ago
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆20Updated 2 years ago
• Stahl-Lab-MSSM / coloc2
  Upgrade to coloc
  ☆13Updated 7 years ago
• RayDebashree / metaUSAT
  metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…
  ☆21Updated 4 years ago
• slowkow / proxysnps
  Get SNP proxies from the 1000 Genomes Project.
  ☆30Updated 7 years ago