Alternatives and similar repositories for mr-code

Users that are interested in mr-code are comparing it to the libraries listed below

• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 3 years ago
• yanglab-emory / TIGAR
  ☆21Updated 4 months ago
• tobyjohnson / gtx
  Genetics ToolboX R package
  ☆32Updated 5 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆46Updated last year
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆21Updated 2 years ago
• clagiamba / moloc
  ☆35Updated 4 years ago
• xqwen / dap
  software package for integrative genetic association analysis
  ☆35Updated 2 years ago
• single-cell-genetics / limix_qtl
  ☆20Updated last week
• xqwen / torus
  QTL Discovery using Annotations
  ☆25Updated 2 years ago
• Stahl-Lab-MSSM / coloc2
  Upgrade to coloc
  ☆13Updated 7 years ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆52Updated last month
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated last year
• bogdanlab / RHOGE
  Estimate genetic correlation using predicted expression
  ☆22Updated 7 years ago
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated last year
• MRCIEU / PhenoSpD
  ☆18Updated 7 years ago
• dcalderon / rolypoly
  Method for identifying trait-relevant gene annotations from GWAS summary statistics.
  ☆18Updated 3 years ago
• jrs95 / gassocplot
  Regional association plots
  ☆26Updated last year
• kjgleason / Primo
  Primo
  ☆16Updated 3 years ago
• RajLabMSSM / echolocatoR
  Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
  ☆38Updated 2 years ago
• omerwe / S-PCGC
  Heritability, genetic correlation and functional enrichment estimation for case-control studies
  ☆19Updated last year
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆16Updated 4 years ago
• karltayeb / cafeh
  ☆13Updated 2 years ago
• Kyoko-wtnb / FUMA_scRNA_data
  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
  ☆23Updated 5 years ago
• immunogenomics / cov-ldsc
  ☆11Updated 2 years ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆41Updated 7 years ago
• RajLabMSSM / catalogueR
  Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).
  ☆13Updated 2 years ago
• thewonlab / H-MAGMA
  ☆34Updated 2 years ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆33Updated 4 years ago
• hakyimlab / gtex-gwas-analysis
  ☆23Updated 4 years ago
• Nealelab / UKBB_ldsc
  Sample code for ldsc analyses in UKBB
  ☆31Updated 2 years ago