Alternatives and similar repositories for scCancer:

Users that are interested in scCancer are comparing it to the libraries listed below

• Miaoyx323 / stCancer
  ☆22Updated 5 months ago
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆30Updated 2 years ago
• ChanLab-UTSW / BreastCancer_Integrated
  ☆28Updated 2 months ago
• Lan-lab / sc-GC
  ☆30Updated 2 years ago
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆20Updated 2 years ago
• lifei176 / Single-cell-atlas-of-sex-differences-and-androgen-effects
  ☆17Updated last year
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆42Updated 5 months ago
• liziyie / Onco-fetal-CAF-in-HCC
  ☆20Updated last year
• yqq-chen / CRC_ICB
  ☆29Updated last year
• SiyuanHuang1 / cpplot
  Visualize the results of cell-cell communication analysis
  ☆22Updated 2 years ago
• guangchunhan / LUAD_Code
  ☆18Updated last year
• PaulingLiu / metaICB
  ☆22Updated 2 years ago
• bioinfo-biols / SEVtras
  sEV-containing droplet identification in scRNA-seq data (SEVtras)
  ☆25Updated 2 months ago
• Junjie-Hu / NSCLC-immunotherapy
  ☆21Updated last year
• jlaffy / scalop
  Single Cell Analysis Operations
  ☆13Updated last month
• SaskiaFreytag / spatial_brain_cancer
  ☆13Updated last year
• Xiaxy-XuLab / PanCAF
  ☆37Updated 2 years ago
• teresho4 / scRNA-seq_atlas_Hs_PBMC_aging
  ☆15Updated last year
• Teichlab / SKM_ageing_atlas
  ☆12Updated last year
• rohitarorayyc / SpatialTranscriptomics
  Spatial Transcriptomic Analysis of OSCC samples
  ☆24Updated last year
• marcalva / hcc_sc_2022
  HCC single cell analysis for Alvarez, Benhammou et al.
  ☆16Updated 2 years ago
• Teichlab / Pan_fetal_immune
  Collection of scripts for analysis of pan fetal immune atlas
  ☆26Updated 2 years ago
• ThomasJamesMitchell / deSCeRNAMut
  Method for de novo mutation calling from droplet based single cell RNA seq data
  ☆14Updated 3 years ago
• liziyie / scDVA
  An R shiny based tool used for single cell RNA-seq data visualization and analysis.
  ☆33Updated 4 years ago
• LungCellAtlas / scRNAseq_pipelines
  Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
  ☆36Updated 4 years ago
• Chuxj / CRC-atlas
  ☆25Updated 10 months ago
• christophhmayr / 2023_Mayr
  Code for the spatial transcriptomic paper on IPF lungs
  ☆16Updated 9 months ago
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆46Updated 3 years ago
• BKI-immuno-KNS / MANAscore
  A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types
  ☆11Updated last month
• Teichlab / PanGIAtlas
  Integration of gut cell atlases
  ☆23Updated 2 months ago