pnnl / leapR

Related projects ⓘ

Alternatives and complementary repositories for leapR

• jeffsocal / tidyproteomics
  An S3 data object and framework for common quantitative proteomic analyses
  ☆34Updated last month
• rformassspectrometry / QFeatures
  Quantitative features for mass spectrometry data
  ☆25Updated last month
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆58Updated 3 months ago
• pmartR / pmartR
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…
  ☆37Updated 3 weeks ago
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆48Updated last year
• yafeng / DEqMS
  DEqMS is a tool for quantitative proteomic analysis
  ☆22Updated 4 years ago
• broadinstitute / protigy
  Proteomics Toolset for Integrative Data Analysis
  ☆22Updated last year
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆33Updated 3 years ago
• Vitek-Lab / MSstatsShiny
  R-Shiny GUI integrated with the MSstats package family
  ☆13Updated this week
• liuhong-jia / scAnno
  ☆23Updated last year
• reactome / ReactomeGSA
  R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis
  ☆22Updated 2 weeks ago
• dbdimitrov / BingleSeq
  BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses
  ☆21Updated 3 years ago
• ComputationalProteomics / NormalyzerDE
  Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.
  ☆19Updated last month
• UCLouvain-CBIO / depmap
  Cancer Dependency Map package
  ☆24Updated 3 months ago
• pcastellanoescuder / POMA
  Omics Data Analysis Tools
  ☆11Updated this week
• shuzhao-li-lab / espol-workshop
  5-day workshop on Metabolomics and Data Analysis
  ☆16Updated 5 years ago
• cpanse / protViz
  Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
  ☆11Updated 11 months ago
• madsen-lab / valiDrops
  ☆16Updated 3 weeks ago
• JoachimGoedhart / VolcaNoseR
  Shiny app for making and annotating Volcano plots
  ☆21Updated 3 months ago
• const-ae / proDA
  Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/
  ☆18Updated last year
• bzhanglab / OmicsEV
  A tool for large scale omics datasets evaluation
  ☆24Updated last year
• DavisLaboratory / msImpute
  Methods for label-free mass spectrometry proteomics
  ☆14Updated 11 months ago
• wwylab / DeMixT
  ☆33Updated 4 months ago
• SlavovLab / SCoPE2
  ☆16Updated last year
• YuLab-SMU / meshes
  MeSH Enrichment and Semantic analyses
  ☆11Updated 3 weeks ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆27Updated 4 months ago
• ProtProtocols / IsoProt
  Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering
  ☆12Updated 5 years ago
• singha53-zz / diablo
  DIABLO - an integrative multi-group, multi-dataset classification method
  ☆21Updated 5 years ago
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆48Updated 5 years ago
• ahmohamed / lipidr
  Data Mining and Analysis of Lipidomics datasets in R
  ☆29Updated last year