Source code for The Protein Design Archive web application.
☆10May 8, 2026Updated last month
Alternatives and similar repositories for protein-design-archive
Users that are interested in protein-design-archive are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code supporting the Protein Design Archive (PDA) database publication☆16May 6, 2026Updated last month
- Molecular Dynamics for Experimentalists☆70Apr 17, 2026Updated 2 months ago
- [𝐧𝐚𝐭𝐮𝐫𝐞 𝐦𝐚𝐜𝐡𝐢𝐧𝐞 𝐢𝐧𝐭𝐞𝐥𝐥𝐢𝐠𝐞𝐧𝐜𝐞] ImmunoStruct enables multimodal deep learning for immunogenicity prediction☆46Mar 5, 2026Updated 3 months ago
- ☆24Dec 4, 2025Updated 6 months ago
- Long disorder consensus predictor☆24Sep 2, 2025Updated 10 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- An open-source project to visualize volumetric image series over multiple temporal axes and render animations of changing morphology.☆20Apr 25, 2026Updated 2 months ago
- Stem plugin to auto-trade between 2 accounts☆10Jan 19, 2015Updated 11 years ago
- An open-source prediction framework for peptide ion collision cross section (CCS) values with python.☆15Oct 6, 2023Updated 2 years ago
- ☆30Aug 8, 2025Updated 10 months ago
- Rank binders by structure modeling☆17Apr 10, 2026Updated 2 months ago
- A biological dual-language foundation model☆12Jun 16, 2025Updated last year
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing GNN☆43Jun 12, 2026Updated 2 weeks ago
- Deep learning tools for converting cryo-EM density maps to protein structures☆21Jan 29, 2025Updated last year
- Collection of useful bioinformatic functions and tools for various computational biology pipelines☆47Jun 22, 2026Updated last week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models☆39Nov 25, 2024Updated last year
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆48May 11, 2026Updated last month
- Design a local part of a protein☆20Jan 12, 2023Updated 3 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆132Aug 3, 2025Updated 10 months ago
- ☆17Jun 10, 2026Updated 3 weeks ago
- A pipeline that used ML model based on Rosetta descriptors to predict the binding affinity of protein-protein complexes☆53Oct 27, 2025Updated 8 months ago
- ☆13May 18, 2025Updated last year
- An improved method for predicting toxicity of the peptides and designing of non-toxic peptides☆30May 8, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Docking Tool Benchmarking Workflow☆25Jul 17, 2024Updated last year
- A Molecular Video-derived Foundation Model for Scientific Drug Discovery (Nature Communications 2024)☆25Dec 24, 2024Updated last year
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)☆55Jun 24, 2026Updated last week
- The Metagenomics-Toolkit is a scalable, data agnostic workflow that automates the analysis of short and long metagenomic reads obtained f…☆26Jun 25, 2026Updated last week
- Frontend server component of the TF2Stadium project.☆19Jan 23, 2023Updated 3 years ago
- This is the GitHub repository accompanying Krishnan, Anahtar, Valeri, et al., 2025☆38Jun 8, 2025Updated last year
- Pipeline for protein-protein interaction prediction☆27Feb 22, 2022Updated 4 years ago
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆24Jan 25, 2024Updated 2 years ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆54Jun 22, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Lightweight induced fit docking☆22May 22, 2023Updated 3 years ago
- Benchmarking code accompanying the release of `bioemu`☆64Jun 5, 2026Updated 3 weeks ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆26Jun 7, 2025Updated last year
- LAST: Latent Space Assisted Adaptive Sampling for Protein Trajectories☆13Dec 17, 2022Updated 3 years ago
- The code for NeurIPS 2023 paper DSR☆14Oct 8, 2023Updated 2 years ago
- ☆31Aug 16, 2025Updated 10 months ago
- ☆56Mar 12, 2026Updated 3 months ago