Matthew The's implementation of MaRaCluster
☆11Jun 26, 2025Updated last year
Alternatives and similar repositories for maracluster
Users that are interested in maracluster are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A deep learning toolkit for mass spectrometry☆95Aug 16, 2026Updated 2 weeks ago
- Data Processing Kitchen Sink for proteomics data☆15Jun 15, 2026Updated 2 months ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆36Jun 13, 2026Updated 2 months ago
- Collisional cross-section prediction for modified and multiconformational peptides☆14Aug 26, 2026Updated last week
- ☆13Mar 19, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 5 years ago
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆33Mar 27, 2026Updated 5 months ago
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆51Aug 17, 2026Updated 2 weeks ago
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15Jul 7, 2026Updated last month
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆45Jun 27, 2022Updated 4 years ago
- DeepLC: Retention time prediction for peptides carrying any modification.☆79Updated this week
- Python-based framework for computational immunomics☆15Jun 11, 2026Updated 2 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆52Aug 5, 2026Updated 3 weeks ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31Jul 16, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆14Aug 20, 2026Updated last week
- Rescoring and spectral library generation pipeline for proteomics.☆58Updated this week
- Python framework for Deep Learning in Proteomics☆42Aug 18, 2026Updated 2 weeks ago
- ☆35Aug 26, 2026Updated last week
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆25Aug 19, 2026Updated 2 weeks ago
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆45Aug 25, 2026Updated last week
- Community-curated tutorials and datasets for ML in proteomics☆61Oct 31, 2025Updated 10 months ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆56Updated this week
- A community dedicated to education of computer coding applied to mass spectrometry applications.☆51Jul 18, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- Computational analysis for mass spectrometry-based proteomics data☆21Feb 22, 2026Updated 6 months ago
- Fundamental functions, annotation pipeline and constants for oktoberfest☆13Updated this week
- The Multiplierz Proteomics Library☆24Apr 27, 2024Updated 2 years ago
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 7 months ago
- Tools for treatment high res mass spectrum of natural organic matter samples☆13Aug 4, 2023Updated 3 years ago
- Python package for efficient mass spectrometry data processing and visualization☆169Aug 18, 2026Updated 2 weeks ago
- Bayesian Optimization for protein design and mining☆28Jul 2, 2026Updated 2 months ago
- Confidence Estimation for Mass Spectrometry Proteomics☆14Aug 14, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An extension of the ProteoWizard framework enabling the support of the mzDB format☆14Feb 12, 2021Updated 5 years ago
- Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…☆161Updated this week
- ☆13Aug 4, 2026Updated 3 weeks ago
- Proteomics search & quantification so fast that it feels like magic☆301Jun 5, 2026Updated 2 months ago
- Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.☆15Feb 17, 2025Updated last year
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Aug 25, 2022Updated 4 years ago
- A modular JavaScript viewer for mass spectrometry data☆12May 20, 2022Updated 4 years ago