Matthew The's implementation of MaRaCluster
☆11Jun 26, 2025Updated 10 months ago
Alternatives and similar repositories for maracluster
Users that are interested in maracluster are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆35Feb 12, 2026Updated 2 months ago
- Data Processing Kitchen Sink for proteomics data☆13Apr 10, 2026Updated 3 weeks ago
- A deep learning toolkit for mass spectrometry☆89Jan 7, 2026Updated 3 months ago
- Collisional cross-section prediction for modified and multiconformational peptides☆13Apr 14, 2026Updated 2 weeks ago
- ☆13Mar 19, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 5 years ago
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15Apr 23, 2026Updated last week
- DeepLC: Retention time prediction for peptides carrying any modification.☆75Apr 24, 2026Updated last week
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆45Jun 27, 2022Updated 3 years ago
- Python-based framework for computational immunomics☆15Apr 1, 2026Updated last month
- Fast and flexible semi-supervised learning for peptide detection in Python☆50Feb 27, 2025Updated last year
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆13Mar 25, 2026Updated last month
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31Feb 12, 2026Updated 2 months ago
- Rescoring and spectral library generation pipeline for proteomics.☆56Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Python framework for Deep Learning in Proteomics☆40Apr 14, 2026Updated 2 weeks ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆26Apr 13, 2026Updated 3 weeks ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆52Updated this week
- Community-curated tutorials and datasets for ML in proteomics☆59Oct 31, 2025Updated 6 months ago
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆45Apr 27, 2026Updated last week
- Python client for PRIDE Archive Rest API.☆40Updated this week
- A community dedicated to education of computer coding applied to mass spectrometry applications.☆52Jul 18, 2025Updated 9 months ago
- A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.☆36Apr 22, 2026Updated last week
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Fundamental functions, annotation pipeline and constants for oktoberfest☆13Apr 25, 2026Updated last week
- Computational analysis for mass spectrometry-based proteomics data☆20Feb 22, 2026Updated 2 months ago
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 3 months ago
- Tools for treatment high res mass spectrum of natural organic matter samples☆11Aug 4, 2023Updated 2 years ago
- Python package for efficient mass spectrometry data processing and visualization☆168Mar 5, 2026Updated last month
- The Multiplierz Proteomics Library☆24Apr 27, 2024Updated 2 years ago
- Confidence Estimation for Mass Spectrometry Proteomics☆14May 28, 2025Updated 11 months ago
- An extension of the ProteoWizard framework enabling the support of the mzDB format☆14Feb 12, 2021Updated 5 years ago
- ☆12Mar 26, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…☆153Updated this week
- Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.☆15Feb 17, 2025Updated last year
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Aug 25, 2022Updated 3 years ago
- Proteomics search & quantification so fast that it feels like magic☆288Apr 21, 2026Updated last week
- HUPO-PSI Standardized peptidoform notation☆24Apr 2, 2026Updated last month
- ☆29May 20, 2025Updated 11 months ago
- A modular JavaScript viewer for mass spectrometry data☆12May 20, 2022Updated 3 years ago