montilab / hypeRLinks
An R Package for Geneset Enrichment Workflows
☆76Updated 2 months ago
Alternatives and similar repositories for hypeR
Users that are interested in hypeR are comparing it to the libraries listed below
Sorting:
- Identify and correct invalid gene symbols☆58Updated 8 months ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 10 months ago
- A General Framework for Consensus Partitioning☆63Updated 6 months ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 5 years ago
- An r package that works as a wrapper to homologene☆46Updated last year
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- Toolkit for Single-Cell Velocity☆58Updated 3 weeks ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated 2 years ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆44Updated 8 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆30Updated 2 months ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- ☆40Updated 7 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆21Updated last month
- ☆15Updated 4 years ago
- R package for benchmarking single cell analysis methods☆32Updated last year
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- ☆62Updated 4 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 6 months ago
- Gene-level general linear mixed model☆22Updated 6 months ago
- An R package to analyze single-cell V(D)J data☆28Updated last year
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- Explore the cancer relevance of your gene list☆51Updated 5 months ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 4 years ago
- R package to visualize scRNA sequencing data.☆20Updated 3 years ago