waldronlab / data-science-seminarLinks
Topics In Data Science and Bioinformatics
☆78Updated last year
Alternatives and similar repositories for data-science-seminar
Users that are interested in data-science-seminar are comparing it to the libraries listed below
Sorting:
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆67Updated last year
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆30Updated 3 months ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 4 years ago
- PHATE dimensionality reduction method implemented in R☆79Updated 4 years ago
- Identify and correct invalid gene symbols☆58Updated 8 months ago
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 6 years ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆105Updated 2 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 10 months ago
- Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCe…☆73Updated last month
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆44Updated 8 months ago
- ☆55Updated 5 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆64Updated last month
- A General Framework for Consensus Partitioning☆63Updated 6 months ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- An r package that works as a wrapper to homologene☆46Updated last year
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- Explore and share your scRNAseq clustering results☆50Updated last year
- Toolkit for Single-Cell Velocity☆58Updated last month
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 3 weeks ago
- Multi-omics studies are available here☆52Updated 3 years ago
- ☆62Updated 4 months ago
- R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.☆66Updated 7 years ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆58Updated 4 years ago
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆106Updated 2 years ago
- Clone of the Bioconductor repository for the scater package.☆96Updated 5 months ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated 2 years ago
- Normalize CITEseq Data☆66Updated 4 months ago