waldronlab / data-science-seminarLinks
Topics In Data Science and Bioinformatics
☆79Updated last year
Alternatives and similar repositories for data-science-seminar
Users that are interested in data-science-seminar are comparing it to the libraries listed below
Sorting:
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆67Updated last year
- An R Package for Geneset Enrichment Workflows☆76Updated 2 weeks ago
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 6 years ago
- Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCe…☆73Updated last month
- Multi-omics studies are available here☆52Updated 3 years ago
- ☆55Updated 6 months ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆31Updated this week
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆105Updated 2 years ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆58Updated 4 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆65Updated last week
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 5 years ago
- R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.☆66Updated 7 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- PHATE dimensionality reduction method implemented in R☆78Updated 4 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 10 months ago
- Explore and share your scRNAseq clustering results☆50Updated last year
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆45Updated 9 months ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- Identify and correct invalid gene symbols☆59Updated 9 months ago
- A package that provides data analysis pipeline for flow cytometry.☆79Updated 5 months ago
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆106Updated 2 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆52Updated 4 years ago
- Clone of the Bioconductor repository for the scater package.☆96Updated 5 months ago
- consistent quantification of external RNA-seq data sets☆58Updated last year
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago
- An R interface to enrichR☆91Updated 6 months ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- ☆62Updated 5 months ago