waldronlab / data-science-seminar
Topics In Data Science and Bioinformatics
☆78Updated last year
Alternatives and similar repositories for data-science-seminar:
Users that are interested in data-science-seminar are comparing it to the libraries listed below
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆66Updated last year
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆44Updated 4 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCe…☆72Updated last month
- ☆37Updated 8 years ago
- Explore and share your scRNAseq clustering results☆50Updated last year
- Identify and correct invalid gene symbols☆58Updated 5 months ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆57Updated 4 years ago
- Normalize CITEseq Data☆65Updated 2 weeks ago
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 6 years ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 4 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- Toolkit for Single-Cell Velocity☆55Updated 3 months ago
- consistent quantification of external RNA-seq data sets☆58Updated last year
- Multi-omics studies are available here☆51Updated 2 years ago
- Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data☆103Updated last year
- Using self-organizing maps for visualization and interpretation of cytometry data☆27Updated last month
- Quantify and interpret divers of variation in multilevel gene expression experiments☆62Updated 3 months ago
- An r package that works as a wrapper to homologene☆45Updated last year
- ☆53Updated 2 months ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- Clone of the Bioconductor repository for the scran package.☆41Updated 7 months ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated last year
- An R interface to enrichR☆90Updated 2 months ago
- Statistical power studies for multi-omics experiments.☆31Updated 3 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆36Updated 2 years ago
- ☆41Updated 4 years ago
- PHATE dimensionality reduction method implemented in R☆79Updated 4 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year