code and data for Liu, Schilling, et al Nat Med 2019
☆17Aug 1, 2024Updated last year
Alternatives and similar repositories for schadendorf-pd1
Users that are interested in schadendorf-pd1 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis☆24Oct 31, 2017Updated 8 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Apr 12, 2023Updated 2 years ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Feb 20, 2016Updated 10 years ago
- A package for the analysis of Imaging Mass Cytometry data☆15Mar 5, 2026Updated 3 weeks ago
- ☆19Oct 23, 2023Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Modular pipeline for integrated analysis of the tumour microenvironment using multiplex imaging☆14Jul 29, 2025Updated 7 months ago
- The project we prepared for the Vision-based Control course, which is one of the Poznan University of Technology Automatic Control and Ro…☆14Jun 24, 2022Updated 3 years ago
- ☆37Sep 20, 2022Updated 3 years ago
- Nature machine intelligence-Stable Cox Regression for Survival Analysis under Distribution Shifts☆23Apr 9, 2025Updated 11 months ago
- Repositorio de datos públicos de argendata☆19Feb 20, 2026Updated last month
- Predictive models and analysis of cancer prognosis and drug response using primary tumor microbial abundances derived from WGS and RNA-se…☆18Nov 13, 2024Updated last year
- Materiales del taller sobre expresiones regulares realizado en febrero de 2021☆10Mar 6, 2021Updated 5 years ago
- Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.☆33Apr 9, 2025Updated 11 months ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Sep 16, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆22Mar 6, 2023Updated 3 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆20Sep 8, 2023Updated 2 years ago
- Calculating Tumor microenvironment score☆29Jan 20, 2023Updated 3 years ago
- My Self-Study Room: keep tidy and lightweight☆30Apr 25, 2024Updated last year
- Detecting somatic mutations and predicting tumor-specific neo-antigens☆29Aug 10, 2021Updated 4 years ago
- Single Cell Epigenome-based Inference of Activity☆19Sep 27, 2023Updated 2 years ago
- Out-of-Core Principal Component Analysis☆19Dec 25, 2017Updated 8 years ago
- Tumor Heterogeneity Analysis (THetA) and THetA2 are algorithms that estimate the tumor purity and clonal/subclonal copy number aberration…☆76Aug 20, 2021Updated 4 years ago
- Generate signature matrix from single cell data.☆11Apr 13, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.☆234Mar 28, 2024Updated last year
- Hypoxia associated molecular feature analysis☆36Nov 19, 2019Updated 6 years ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Aug 17, 2022Updated 3 years ago
- Easy Copy Number !☆21Aug 27, 2025Updated 7 months ago
- MutSig2CV from Lawrence et al. 2014☆33Aug 18, 2020Updated 5 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆28Jan 9, 2021Updated 5 years ago
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆36Mar 5, 2026Updated 3 weeks ago
- Vaeda method for computational doublet annotation☆19Feb 1, 2026Updated last month
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆26Feb 8, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- ☆12Mar 5, 2024Updated 2 years ago
- ☆12Nov 6, 2023Updated 2 years ago
- Reference Genome Independent Differential DNA Methylation Analysis☆11Aug 19, 2021Updated 4 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆11Feb 25, 2022Updated 4 years ago
- Single cell analysis in regenerative lineages and immune-mediated pruning in lung cancer metastasis☆23Jun 5, 2020Updated 5 years ago
- NExt generation Analysis Toolbox☆14Oct 18, 2015Updated 10 years ago