vanallenlab / schadendorf-pd1Links
code and data for Liu, Schilling, et al Nat Med 2019
☆17Updated last year
Alternatives and similar repositories for schadendorf-pd1
Users that are interested in schadendorf-pd1 are comparing it to the libraries listed below
Sorting:
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 4 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- corto (Correlation Tool): an R package to generate correlation-based DPI networks☆20Updated 2 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated last year
- A General Framework for Consensus Partitioning☆63Updated 8 months ago
- ☆31Updated 5 years ago
- Collection of useful methods for single cell analysis☆14Updated last year
- ☆48Updated last year
- deconvolution for RNAseq and bisulfite sequencing☆10Updated 5 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- ☆25Updated 3 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Updated 4 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆37Updated 6 months ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- ☆37Updated last week
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Marker gene selection from scRNA-seq data☆15Updated 5 years ago
- R package☆22Updated last year
- ☆43Updated 4 years ago
- An R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database into a Seurat object.☆26Updated 2 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆16Updated 4 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago
- eVITTA: an easy Visualization and Inference Toolbox for Transcriptome Analysis☆12Updated last year
- ☆30Updated 7 years ago
- ☆41Updated 7 years ago
- A public list of computational methods for cell type inference from genome-scale DNA methylation data☆13Updated 6 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago