getzlab / MutSig2CVLinks
MutSig2CV from Lawrence et al. 2014
☆33Updated 5 years ago
Alternatives and similar repositories for MutSig2CV
Users that are interested in MutSig2CV are comparing it to the libraries listed below
Sorting:
- An R package to time somatic mutations☆65Updated 5 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆53Updated 3 years ago
- ☆38Updated 5 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 3 years ago
- Comprehensive genome-wide visualization of absolute copy number and copy neutral variations☆29Updated 6 years ago
- Code accompanying The Evolutionary history of 2,658 cancers☆46Updated 4 years ago
- ☆44Updated 7 years ago
- ☆48Updated last year
- ☆31Updated last year
- Next-Gen Sequencing tools from the Horvath Lab☆45Updated last month
- An R package to plot maps of clone distributions in somatic evolution☆19Updated 2 years ago
- DeCiFer is an algorithm that simultaneously selects mutation multiplicities and clusters SNVs by their corresponding descendant cell frac…☆22Updated last year
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆20Updated 6 years ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆32Updated 10 months ago
- Fork of the Polysolver project☆33Updated 6 years ago
- ☆13Updated 8 years ago
- Filtering of PDX samples for mouse derived reads☆28Updated 3 weeks ago
- Automate Absolute Copy Number Calling using 'ABSOLUTE' package☆41Updated 2 years ago
- a versatile and flexible pipeline for analysing different variants of ChIA-PET data☆36Updated last year
- Single Cell Analysis Automated Workflow☆28Updated 2 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆64Updated 2 weeks ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 5 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆72Updated last year
- RAGE-seq scripts☆18Updated 4 years ago
- ☆83Updated 9 months ago
- Clonality Inference in Multiple Tumor Samples using Phylogeny☆15Updated 10 years ago
- Homologous recombination deficiency in TCGA PanCancer Atlas☆29Updated 5 years ago