PansccSpat / SpatialMapESCC
☆14Updated 6 months ago
Alternatives and similar repositories for SpatialMapESCC:
Users that are interested in SpatialMapESCC are comparing it to the libraries listed below
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆30Updated 2 years ago
- Code for the spatial transcriptomic paper on IPF lungs☆16Updated 9 months ago
- ☆15Updated 2 years ago
- Spatial transcriptomics of heart tissue☆21Updated 2 years ago
- Single Cell Analysis Operations☆13Updated last month
- ☆25Updated 11 months ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 3 years ago
- ☆24Updated 2 months ago
- ☆20Updated last year
- ☆18Updated last year
- ☆15Updated last year
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated 2 months ago
- ☆12Updated last year
- ☆28Updated 2 months ago
- ☆17Updated last year
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆11Updated 7 months ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated last year
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆25Updated 2 months ago
- Method for de novo mutation calling from droplet based single cell RNA seq data☆14Updated 3 years ago
- Code used to process the data of the HBCA project☆27Updated last year
- ☆48Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆36Updated 4 years ago
- ☆22Updated last year
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆28Updated 4 months ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆45Updated 4 months ago
- R code used to analyze single cell PDAC data☆34Updated 10 months ago
- Hierarchical Cell Annotation☆20Updated 5 months ago
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated last year
- Visualize the results of cell-cell communication analysis☆22Updated 2 years ago