kevlitchfield1 / CPI1000_paperLinks
☆20Updated 4 years ago
Alternatives and similar repositories for CPI1000_paper
Users that are interested in CPI1000_paper are comparing it to the libraries listed below
Sorting:
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 4 years ago
- ☆47Updated 5 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆18Updated 2 years ago
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- Repository for Cibersortx☆60Updated 4 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- ☆47Updated 9 months ago
- Code repository for single cell RNA-seq☆38Updated 5 years ago
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆31Updated 5 years ago
- ☆51Updated last year
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- An open source and flexible pipeline to analyze DNBelab C Series single-cell RNA datasets.☆35Updated 2 years ago
- An R package to plot maps of clone distributions in somatic evolution☆17Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- ☆30Updated 7 years ago
- Draw phylogenetic trees of tumor evolution☆86Updated 2 years ago
- scWGCNA☆61Updated 2 years ago
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆43Updated last year
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- Repository for codes for the HBCA paper☆38Updated 2 years ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆77Updated 6 months ago
- A R package for advanced single cell data viz☆68Updated 2 months ago
- Multiscale embedded gene co-expression network analysis☆56Updated last year
- ☆17Updated 2 years ago
- ☆32Updated 4 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆60Updated 2 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆38Updated last year
- An R package for classification of immune subtypes, in cancer, using gene expression data.☆46Updated 10 months ago