um-dang / conda_on_the_cluster
A brief tutorial introducing learners to the Conda environment and package management system.
☆27Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for conda_on_the_cluster
- Data Wrangling and Processing for Genomics☆71Updated this week
- ☆16Updated 7 years ago
- Transcript quantification import with automatic metadata detection☆67Updated last month
- Genetics training camp☆21Updated 4 years ago
- Introduction to Snakemake for Bioinformatics☆18Updated this week
- BiocSwirl is a series of in-depth swirlify generated courses used to teach bioinformatics workflows in R/Bioconductor using an interactiv…☆30Updated 3 years ago
- NBIS/Elixir course: Tools for Reproducible Research☆60Updated this week
- Project Organization and Management for Genomics☆24Updated this week
- Intro to R and RStudio for Genomics☆28Updated this week
- Template for building a bioconductor workshop package using github actions☆19Updated 4 months ago
- R package providing query functionality to BioMart instances like Ensembl☆36Updated 3 months ago
- ☆27Updated 4 years ago
- Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3☆37Updated 2 years ago
- ☆16Updated last year
- Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.☆11Updated 4 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 5 years ago
- Bioconductor package that makes BIG data pint-sized.☆20Updated 9 months ago
- High-throughput gene to knowledge mapping through massive integration of public sequencing data.☆31Updated 5 years ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆30Updated this week
- Efficient target prediction incorporating accessibility of interaction sites☆46Updated last week
- A workflow for creating small NGS test data sets, useful for continuous integration.☆21Updated 3 months ago
- Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere☆20Updated 3 weeks ago
- ☆19Updated 2 years ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆31Updated 4 months ago
- Genomics Workshop Overview☆46Updated this week
- Workflow management with Nextflow and nf-core☆25Updated this week
- This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…☆28Updated 6 months ago
- DEvis: an R package for aggregation and visualization of differential expression data☆20Updated 3 years ago
- A template for standard compliant snakemake-workflows☆89Updated last year
- UChicago BSD Quantitative Bootcamp 2020☆10Updated 3 years ago