☆17Mar 22, 2022Updated 4 years ago
Alternatives and similar repositories for DeepLigand
Users that are interested in DeepLigand are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Aug 18, 2022Updated 3 years ago
- ☆20Mar 20, 2022Updated 4 years ago
- Amino acid embedding and Convolutional Neural Network for HLA Class I-peptide binding prediction☆26Aug 3, 2017Updated 8 years ago
- Distantly Supervised Biomedical Named Entity Recognition with Dictionary Expansion: https://ieeexplore.ieee.org/document/8983212☆12Jun 4, 2020Updated 6 years ago
- ☆11Aug 5, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Published at Bioinformatics☆12Jul 4, 2024Updated last year
- software for the analysis and visualization of deep mutational scanning data☆35Oct 6, 2022Updated 3 years ago
- ☆16Aug 14, 2019Updated 6 years ago
- MHCAttnNet: Allele-Peptide predictions for class I & class II MHC alleles☆30Feb 14, 2021Updated 5 years ago
- Supplementary data for the ACME algorithm☆23Oct 2, 2022Updated 3 years ago
- DSResSol: A sequence-based solubility predictor created with Dilated Squeeze Excitation Residual Networks☆12May 30, 2024Updated 2 years ago
- 🎨 R package: Unified Handling of Graphics Devices☆19May 9, 2026Updated last month
- Visualization toolkit for differential splicing events☆17Apr 19, 2026Updated 2 months ago
- rm-protection implemented in C☆11Feb 10, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence☆26May 16, 2026Updated last month
- Comprehensive and scalable differential splicing analyses☆18Dec 19, 2025Updated 6 months ago
- From metagenomes to epitopes and beyond☆12Apr 30, 2026Updated last month
- Search text files for DNA sequences and their reverse complements☆13Mar 2, 2017Updated 9 years ago
- Mycobacterium tuberculosis complex lineage typing☆10Jun 22, 2025Updated 11 months ago
- This repository contains the code accompanying the paper "Learning Informative Representations of Biomedical Relations with Latent Variab…☆15Sep 28, 2021Updated 4 years ago
- Implementation codes for NeurIPS23 paper "Spectral Invariant Learning for Dynamic Graphs under Distribution Shifts"☆14Mar 19, 2024Updated 2 years ago
- ☆12Jun 20, 2024Updated last year
- A novel approach to the classification of antimicrobial peptides (AMPs) using pre-trained language models to create contextual vectorized…☆18Sep 10, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- The AMRgen package provides tools for interpreting antimicrobial resistance (AMR) genes, integrating genomic data with phenotypic antimic…☆20May 23, 2026Updated 3 weeks ago
- Python script for calling SNPs, MNPs, and indels in mitochondrial DNA.☆10Apr 19, 2016Updated 10 years ago
- CS 230 Final project. Owned by Soham Gadgil, Sun Woo Kang, and Erick Siavichay-Velasco☆12Sep 30, 2022Updated 3 years ago
- For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow☆13Oct 22, 2018Updated 7 years ago
- Tools and utilities for making use of mastiff☆12Mar 10, 2023Updated 3 years ago
- Codebase for "Linking Surface Facts to Large-Scale Knowledge Graphs" (EMNLP 2023)☆13May 8, 2024Updated 2 years ago
- A sequence-based pan model for peptide-MHC II binding affinity prediction.☆21May 16, 2022Updated 4 years ago
- Overview of GDC Harmonization Workflows☆44May 5, 2026Updated last month
- Mycobacterial pipeline☆11Sep 11, 2025Updated 9 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆11Feb 20, 2022Updated 4 years ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28May 16, 2021Updated 5 years ago
- CWL implementation of CloudNeo: A cloud pipeline for identifying patient-specific tumor neoantigens☆19Apr 19, 2019Updated 7 years ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆64Feb 2, 2026Updated 4 months ago
- Dimensionful types for Nim.☆20Aug 7, 2018Updated 7 years ago
- Altered TCR Ligand Affinities and Structures☆12Dec 1, 2023Updated 2 years ago
- my blog☆10Oct 21, 2016Updated 9 years ago