☆17Mar 22, 2022Updated 4 years ago
Alternatives and similar repositories for DeepLigand
Users that are interested in DeepLigand are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Aug 18, 2022Updated 4 years ago
- Amino acid embedding and Convolutional Neural Network for HLA Class I-peptide binding prediction☆27Aug 3, 2017Updated 9 years ago
- ☆11Aug 5, 2020Updated 6 years ago
- Distantly Supervised Biomedical Named Entity Recognition with Dictionary Expansion: https://ieeexplore.ieee.org/document/8983212☆12Jun 4, 2020Updated 6 years ago
- ☆21Mar 20, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆11Feb 20, 2022Updated 4 years ago
- software for the analysis and visualization of deep mutational scanning data☆34Oct 6, 2022Updated 4 years ago
- Published at Bioinformatics☆12Jul 4, 2024Updated 2 years ago
- IMGT segment library converted to RepSeq.IO JSON format☆15Mar 21, 2023Updated 3 years ago
- Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence☆27Updated this week
- Tools to explore Minimum Decycling Sets (MDSs) of the de Bruijn graph☆12Sep 11, 2025Updated last year
- MHCAttnNet: Allele-Peptide predictions for class I & class II MHC alleles☆30Feb 14, 2021Updated 5 years ago
- ☆16Aug 14, 2019Updated 7 years ago
- 🎨 R package: Unified Handling of Graphics Devices☆19May 9, 2026Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python module for the calculation of shape complementarity☆13Apr 4, 2026Updated 6 months ago
- rm-protection implemented in C☆11Feb 10, 2017Updated 9 years ago
- Supplementary data for the ACME algorithm☆24Oct 2, 2022Updated 4 years ago
- DSResSol: A sequence-based solubility predictor created with Dilated Squeeze Excitation Residual Networks☆12May 30, 2024Updated 2 years ago
- nf-test utility functions☆13Sep 29, 2026Updated last month
- Comprehensive and scalable differential splicing analyses☆18Dec 19, 2025Updated 10 months ago
- From metagenomes to epitopes and beyond☆12Updated this week
- Software tools for the analysis of epitope-specific T cell receptor (TCR) repertoires (scroll down for the README)☆87Oct 6, 2021Updated 5 years ago
- A PhD Thesis Template for School of Computer Science & Informatics in Cardiff University☆10Jul 5, 2011Updated 15 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Mycobacterial pipeline☆11Sep 11, 2025Updated last year
- Mycobacterium tuberculosis complex lineage typing☆11Jun 22, 2025Updated last year
- predicting peptide and TCR interaction☆19Jan 27, 2021Updated 5 years ago
- A novel approach to the classification of antimicrobial peptides (AMPs) using pre-trained language models to create contextual vectorized…☆17Sep 10, 2024Updated 2 years ago
- This repository contains the code accompanying the paper "Learning Informative Representations of Biomedical Relations with Latent Variab…☆15Sep 28, 2021Updated 5 years ago
- Genome-scale model for Mus musculus☆14Oct 6, 2026Updated 3 weeks ago
- A python script to break a sentence into clauses.☆34May 15, 2021Updated 5 years ago
- For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow☆13Oct 22, 2018Updated 8 years ago
- Tools and utilities for making use of mastiff☆12Mar 10, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Discrete Cosine Spectral Diffusion for Protein Dynamics☆15Aug 31, 2026Updated last month
- Python script for calling SNPs, MNPs, and indels in mitochondrial DNA.☆10Apr 19, 2016Updated 10 years ago
- Locate transgenic insertion sites☆11Mar 14, 2023Updated 3 years ago
- Visualization toolkit for differential splicing events☆21Apr 19, 2026Updated 6 months ago
- Altered TCR Ligand Affinities and Structures☆13Dec 1, 2023Updated 2 years ago
- Open Targets Library ETL Pipeline | Apache Beam☆16May 5, 2021Updated 5 years ago
- Gitools, is a framework for analysis and visualization of genomic data. Data and results are represented as browsable heatmaps. Gitools a…☆28Dec 5, 2022Updated 3 years ago