JJAlmagro / subcellular_localization
☆58Updated 7 years ago
Alternatives and similar repositories for subcellular_localization:
Users that are interested in subcellular_localization are comparing it to the libraries listed below
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆43Updated 5 years ago
- ☆70Updated last year
- Mutation effects predicted from sequence co-variation☆62Updated 7 years ago
- ☆59Updated last year
- Analysis and figure code from Alley et al. 2019.☆58Updated last year
- Modelling the Language of Life - Deep Learning Protein Sequences☆72Updated 4 years ago
- A convolutional neural network to predict PPI interactions☆41Updated 6 years ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆16Updated 2 years ago
- CRISPR Cas9 ontarget prediction software☆26Updated last year
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆44Updated 5 months ago
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆45Updated last year
- Evolutionary velocity with protein language models☆84Updated last year
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆163Updated 10 months ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 2 years ago
- Multi-class signal peptide prediction and structure decoding model.☆83Updated 11 months ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 7 years ago
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆66Updated 5 months ago
- For anyone who are eager to applying deep learning in bioinformatics!☆122Updated 6 years ago
- A Python tool for prediction MHC ligand☆33Updated 5 years ago
- ☆53Updated 3 years ago
- Draw RNA secondary structures in python.☆46Updated 4 months ago
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Updated 4 years ago
- Training and testing of DeepBind models.☆92Updated 9 years ago
- python tools for TCR:peptide-MHC modeling and analysis☆67Updated 9 months ago
- HLA-II ligand predictor.☆38Updated last year
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆48Updated 9 months ago
- 🧛 Deep generative models for TCR sequences 🧛☆17Updated 2 years ago
- ProNA2020: System predicting protein-DNA, protein-RNA and protein-protein binding sites from sequence☆14Updated 4 years ago
- Models, design algorithms, and other software related to Salis lab publications☆27Updated 2 months ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆81Updated 4 months ago