JJAlmagro / subcellular_localization
☆59Updated 7 years ago
Alternatives and similar repositories for subcellular_localization
Users that are interested in subcellular_localization are comparing it to the libraries listed below
Sorting:
- Modelling the Language of Life - Deep Learning Protein Sequences☆72Updated 4 years ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆47Updated 5 years ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Updated 2 years ago
- Mutation effects predicted from sequence co-variation☆65Updated 7 years ago
- Analysis and figure code from Alley et al. 2019.☆59Updated 2 years ago
- python tools for TCR:peptide-MHC modeling and analysis☆75Updated last year
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆47Updated last year
- deep protein solubility prediction☆36Updated 6 years ago
- Multi-class signal peptide prediction and structure decoding model.☆84Updated 3 months ago
- A convolutional neural network to predict PPI interactions☆42Updated 6 years ago
- ☆128Updated 4 years ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆48Updated 9 months ago
- ☆73Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆68Updated 2 years ago
- Evolutionary velocity with protein language models☆90Updated last year
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆53Updated last year
- Function prediction using a deep ontology-aware classifier☆83Updated 2 years ago
- DeepGO with GOPlus axioms☆93Updated last year
- Modelling the Language of Life - Deep Learning Protein Sequences☆119Updated 4 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆58Updated 4 years ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆172Updated last year
- HLA-II ligand predictor.☆43Updated 2 years ago
- A generative latent variable model for biological sequence families.☆215Updated 3 years ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 8 years ago
- A new approach for representing biological sequences☆99Updated 8 months ago
- Python package and command line tool for epitope prediction☆51Updated 9 months ago
- De novo protein structure prediction using iteratively predicted structural constraints☆57Updated 3 years ago
- CNN architecture for predicting DNA binding sites for Transcription Factors☆52Updated 6 years ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆60Updated 2 months ago