🧛 Deep generative models for TCR sequences 🧛
☆17Apr 4, 2022Updated 4 years ago
Alternatives and similar repositories for vampire
Users that are interested in vampire are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code and Data for Generative modeling for AAV design☆10Nov 13, 2023Updated 2 years ago
- Deep Learning Method to Identify Cancer Associated TCRs☆46Aug 2, 2022Updated 3 years ago
- ☆29Dec 17, 2019Updated 6 years ago
- Infer selection pressures on features of amino acid CDR3 sequences.☆25Apr 17, 2024Updated 2 years ago
- ☆17Jun 24, 2021Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆22Jun 10, 2024Updated 2 years ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆63Jun 24, 2026Updated last week
- predicting peptide and TCR interaction☆20Jan 27, 2021Updated 5 years ago
- Deciphering protein evolution and fitness landscapes with latent space models☆37Nov 2, 2021Updated 4 years ago
- ☆20Feb 25, 2025Updated last year
- Analysis tools for PhIP-seq experiments☆12Jan 24, 2022Updated 4 years ago
- Predicting immunogenic peptide recognized by TCR through ensemble deep learning☆18Apr 22, 2024Updated 2 years ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆76Jun 22, 2026Updated last week
- Quantifying the nativeness of antibody sequences using long short-term memory networks☆18Dec 17, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Compute generation probabilities of CDR3 amino acid and nucleotide sequences☆67Nov 18, 2025Updated 7 months ago
- Peptide library design☆23Sep 8, 2020Updated 5 years ago
- Jupyter notebooks from our weekly (or so) hackathons☆11Dec 3, 2024Updated last year
- Scripts for NGS processing☆16Sep 6, 2017Updated 8 years ago
- Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution☆14May 4, 2022Updated 4 years ago
- Deep Exploration Networks - Diverse Deep Generative Models for DNA, RNA and Protein Sequences☆31Oct 1, 2021Updated 4 years ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆60May 4, 2022Updated 4 years ago
- 2018 RDKit UGM☆14Sep 28, 2018Updated 7 years ago
- ☆11Mar 12, 2026Updated 3 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- An interactive browser for the VDJdb database☆16Jun 24, 2026Updated last week
- 📝 [Tutorial] RepSeq data mining basics in R☆11Mar 13, 2019Updated 7 years ago
- Reproducibility Repo for mvTCR paper☆13Apr 2, 2024Updated 2 years ago
- Temporal Pathway Synthesizer☆17Jun 28, 2024Updated 2 years ago
- Search public databases for given genotypic information☆12Mar 21, 2018Updated 8 years ago
- Python package to plot sequence logos☆29Sep 21, 2023Updated 2 years ago
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆24Jul 2, 2024Updated 2 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- Predicting T Cell Receptor Specificity with Deep Learning☆10Jul 17, 2019Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- FREE Divergence Error-Correcting DNA Barcodes☆10Jun 23, 2018Updated 8 years ago
- This repository is for the paper "A generative nonparametric Bayesian model for whole genomes"☆15Jun 7, 2023Updated 3 years ago
- pygor3 repository☆10Nov 20, 2025Updated 7 months ago
- Open Targets Genetics UI☆15Jan 31, 2025Updated last year
- HyLight is a strain aware de novo assembly method based on the overlap-layout-consensus (OLC) paradigm that leverages the strengths of NG…☆12Sep 18, 2024Updated last year
- Repository for the T2D/obesity experiments run in the Metapheno paper☆15Feb 6, 2019Updated 7 years ago
- A package for making MuE observation models in Edward2.☆13Jun 10, 2021Updated 5 years ago