arefeen / DeepPASTALinks
☆10Updated 5 years ago
Alternatives and similar repositories for DeepPASTA
Users that are interested in DeepPASTA are comparing it to the libraries listed below
Sorting:
- MHC Class I and Class II neoantigen binding prediction☆32Updated last month
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆39Updated 3 years ago
- Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellula…☆44Updated 4 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- Deep neural networks for predicting CpG methylation☆37Updated 8 years ago
- Deep Learning Method to Identify Cancer Associated TCRs☆47Updated 3 years ago
- ☆19Updated 4 years ago
- ☆34Updated 2 years ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆82Updated last year
- A deep learning package for predicting TF binding☆42Updated 5 years ago
- ☆38Updated last year
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- A hybrid deep convolutional neural network for predicting chromatin accessibility☆25Updated 6 years ago
- HLA-II ligand predictor.☆44Updated 2 years ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆69Updated this week
- ☆31Updated 5 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- Tissue-specific variant effect predictions on splicing☆42Updated 2 years ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆26Updated 8 years ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆29Updated 9 months ago
- Prize-Collecting Steiner Forests for Interactomes☆61Updated last year
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆31Updated 2 months ago
- 🏺 Exploring novel tumor epitope identification☆36Updated 4 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆49Updated 2 years ago
- ☆22Updated 8 years ago
- mygene is an easy-to-use Python wrapper to access MyGene.Info services.☆93Updated 8 months ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆65Updated 4 years ago
- PRedictor of IMmunogenic Epitopes☆24Updated 4 months ago
- Python package to plot sequence logos☆29Updated last year
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆36Updated 7 years ago