☆10May 16, 2020Updated 6 years ago
Alternatives and similar repositories for DeepPASTA
Users that are interested in DeepPASTA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tissue-specific variant effect predictions on splicing☆44May 23, 2023Updated 2 years ago
- python codes for iDNA-ABF: multi-scale deep biological language learning model for the accurate and interpretable prediction of DNA methy…☆15May 6, 2024Updated 2 years ago
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆43Oct 1, 2021Updated 4 years ago
- pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks☆86Oct 22, 2019Updated 6 years ago
- Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data☆32Aug 10, 2021Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Evolution-inspired data augmentations for PyTorch-based models for regulatory genomics☆25Jun 3, 2025Updated 11 months ago
- An Interpretable Self-Attention Network with block-attention and attention-attribution.☆12Sep 22, 2023Updated 2 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Jan 9, 2020Updated 6 years ago
- Analysis of RNA epitranscriptome sequencing data with affinity-based shotgun sequencing approach☆10Apr 2, 2020Updated 6 years ago
- predicting expression effects of human genome variants ab initio from sequence☆136Jan 28, 2025Updated last year
- Geometry-aware protein binding site predictor☆28Aug 29, 2024Updated last year
- pytorch faster r-cnn☆11Dec 21, 2020Updated 5 years ago
- [知识管理]A simple yet powerful blog system for reading and organizing txt/Markdown/html files, based on PHP. 订阅/关注请点顶部的 Watch，收藏/点赞请点顶部的Sta…☆17Updated this week
- Interpretable model of sub-cellular RNA localization.☆12Dec 19, 2022Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- For training very deep networks☆10Jun 12, 2017Updated 8 years ago
- Rhetorical sentence classification using LLMs☆11Oct 26, 2025Updated 6 months ago
- R package to detect splicing QTLs (sQTLs)☆15Feb 28, 2021Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆34Aug 1, 2024Updated last year
- ☆18Dec 5, 2024Updated last year
- Python module for the easy handling and analysis of DNase-seq data☆37Jul 18, 2019Updated 6 years ago
- A simple pythonic interface to biomart.☆60Feb 6, 2020Updated 6 years ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 6 years ago
- Concise: Keras extension for regulatory genomics☆35Dec 26, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Cell2location paper - Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics☆15Nov 26, 2022Updated 3 years ago
- Identifying bioactive peptide function using multi-label deep learning☆10Nov 16, 2021Updated 4 years ago
- Single-Cell Analysis of Immune Cells from Renal Clear Cell Carcinoma☆21Aug 15, 2021Updated 4 years ago
- Code accompanying the paper "Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively…☆12May 9, 2026Updated last week
- [Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely …☆33Oct 23, 2021Updated 4 years ago
- Leveraging Local and Global Patterns for Self-Attention Networks☆12Jun 3, 2019Updated 6 years ago
- a cythonized, extended version of the interval search tree in bx☆30Jun 4, 2019Updated 6 years ago
- ☆17Dec 18, 2024Updated last year
- ☆18Jan 2, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Explainable deep hypergraph learning modeling the peptide secondary structure prediction☆13Feb 27, 2023Updated 3 years ago
- Multi-Teacher Distillation for Protein embedding☆12May 31, 2024Updated last year
- A cookiecutter template for a modern C++ project with python bindings☆32Jul 25, 2022Updated 3 years ago
- Code for "Fusion Label Enhancement for Multi-Label Learning" in IJCAI-ECAI 2022.☆10Apr 4, 2023Updated 3 years ago
- ☆10Mar 19, 2020Updated 6 years ago
- Python Toolbox For Rosetta Silent Files Processing☆10Aug 2, 2021Updated 4 years ago
- Python library for Ceteris Paribus Plots (What-if plots)☆29Apr 23, 2021Updated 5 years ago