shenmengyuan / RNA_seq_Biotrainee
DEG analysis and KEGG/GO enrichment analysis
☆67Updated 7 years ago
Alternatives and similar repositories for RNA_seq_Biotrainee:
Users that are interested in RNA_seq_Biotrainee are comparing it to the libraries listed below
- Scripts for next generation sequencing☆48Updated 5 years ago
- ☆51Updated 6 years ago
- ☆21Updated 5 years ago
- fork of RSeQC python RNAseq metrics suit of tools☆48Updated 6 years ago
- Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome☆40Updated 4 years ago
- A versatile aligning pipeline for bisulfite sequencing data☆65Updated 6 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆43Updated 4 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆62Updated 8 months ago
- My own tools code for NGS data analysis (Next Generation Sequencing)☆29Updated 5 years ago
- shiny app for WGCNA...☆28Updated 3 months ago
- ☆89Updated 4 years ago
- RNA-Seq analysis workflow☆104Updated 3 years ago
- FEELnc : FlExible Extraction of LncRNA☆87Updated 6 months ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆63Updated last year
- A simple plot library☆52Updated 7 years ago
- ☆45Updated 5 years ago
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24Updated 5 years ago
- ☆54Updated 3 years ago
- A Nextflow-based pipeline for comprehensive analyses of long non-coding RNAs from RNA-seq datasets☆82Updated 2 years ago
- ☆48Updated 3 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆62Updated 4 months ago
- Create KEGG.db Package☆60Updated 2 years ago
- Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) da…☆45Updated last year
- release version☆51Updated 2 years ago
- Microbiome Protocol eBook related documents and scripts.☆47Updated 3 years ago
- The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…☆42Updated last year
- Transcriptomics Visualization R package.☆70Updated last year
- Tutorial Website☆57Updated 4 years ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆106Updated last year
- ☆39Updated last year