Estimate PTM hotspots in protein sequence alignments
☆16Feb 6, 2019Updated 7 years ago
Alternatives and similar repositories for ptm_hotspots
Users that are interested in ptm_hotspots are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata☆12Feb 27, 2026Updated 6 months ago
- R package for functionally scoring phosphorylation sites☆22Nov 3, 2019Updated 6 years ago
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆14Aug 21, 2026Updated last week
- a pipeline for running MD simulations in the presence of probe molecules for druggability assessment☆12Dec 10, 2025Updated 8 months ago
- PocketMaster is a flexible and automated tool for analyzing, clustering, and visualizing protein binding sites. It allows you to quickly …☆19Feb 22, 2026Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Deep proteome inference from peptide profiles☆13Jul 16, 2020Updated 6 years ago
- BLAST-Like Alignment Tool☆23Jan 11, 2019Updated 7 years ago
- python based queries for the proteomesoflife neo4j network database☆14Jun 17, 2020Updated 6 years ago
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 5 years ago
- CliXO algorithm re-implemented☆16Nov 9, 2021Updated 4 years ago
- Printing text using protein structures☆14Aug 9, 2021Updated 5 years ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Jun 25, 2026Updated 2 months ago
- Recomb-Mix: a local ancestry inference tool☆18Aug 6, 2026Updated 3 weeks ago
- CArbohydrate-Protein Site IdentiFier☆16Aug 22, 2023Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆30Apr 10, 2023Updated 3 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Apr 7, 2026Updated 4 months ago
- Materials for teaching demographic methods☆24Apr 12, 2022Updated 4 years ago
- scRNAseq clustering tool☆11Apr 14, 2020Updated 6 years ago
- ☆19May 27, 2022Updated 4 years ago
- Harvard FAS informatics scRNAseq workshop website☆40Aug 8, 2019Updated 7 years ago
- C++ lossless and lossy mass spectrometry compression☆15Sep 16, 2021Updated 4 years ago
- TFregulomeR reveals transcription factors’ context-specific features and functions☆15Apr 18, 2022Updated 4 years ago
- Identified novel mouse spermatogenesis biomarkers based on single-cell RNA sequencing data☆11Jun 7, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- "Dissecting cell-type composition and activity-dependent transcriptional state in mammalian brains by massively parallel single-nucleus R…☆13Jan 7, 2018Updated 8 years ago
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning☆13Feb 8, 2021Updated 5 years ago
- PhosR is a package for the comprehensive analysis of phosphoproteomic data.☆21Jun 8, 2026Updated 2 months ago
- Publication Page for ArchR Manuscript 2020☆24Aug 17, 2021Updated 5 years ago
- Phylodynamic inference☆23May 15, 2020Updated 6 years ago
- scRNA seq analysis using Seurat V3☆13Jun 23, 2021Updated 5 years ago
- Code and scripts used in analysis of snRNAseq cerebellar cortex atlas☆14Oct 11, 2021Updated 4 years ago
- ☆12Jan 14, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Find hot data sets in your area (of research)!☆16Dec 20, 2018Updated 7 years ago
- MOLeculAR structure annoTator☆33Oct 2, 2024Updated last year
- Public repository for the biodata resource inventory performed in 2022.☆11Nov 25, 2025Updated 9 months ago
- Predict disorder and disorder binding from AlphaFold structures☆20Nov 25, 2024Updated last year
- Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model☆14Oct 19, 2023Updated 2 years ago
- A pipeline to transform images into valuable analysis items☆19Aug 19, 2026Updated 2 weeks ago
- Load bioinformatics datasets into a local database☆11Apr 8, 2025Updated last year