evocellnet / ptm_hotspotsLinks
Estimate PTM hotspots in protein sequence alignments
☆14Updated 6 years ago
Alternatives and similar repositories for ptm_hotspots
Users that are interested in ptm_hotspots are comparing it to the libraries listed below
Sorting:
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 7 months ago
- Integration ribosome profiling - mass spectrometry☆15Updated last month
- python based queries for the proteomesoflife neo4j network database☆14Updated 5 years ago
- PepQuery: a targeted peptide search engine☆12Updated last year
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆17Updated 11 months ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- PRedictor of IMmunogenic Epitopes☆24Updated 4 months ago
- ☆18Updated last year
- R package for functionally scoring phosphorylation sites☆21Updated 5 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- R package for analysing proteomics data☆50Updated 2 years ago
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 5 months ago
- Docker for MetaboAnalyst 4.0☆24Updated 4 years ago
- SPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.☆12Updated 2 years ago
- Bayesian enrichment estimation in R☆11Updated 3 years ago
- Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.☆41Updated 3 weeks ago
- A guide to running MaxQuant in Linux☆34Updated 5 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆23Updated 3 months ago
- A collection of useful functions for bioinformatics data analysis☆25Updated 2 months ago
- TFregulomeR reveals transcription factors’ context-specific features and functions☆16Updated 3 years ago
- ☆38Updated last year
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …☆33Updated last month
- Automated quantitative analysis of DIA proteomics mass spectrometry measurements.☆19Updated 8 months ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- Code to run OncoSig Analyses☆18Updated 4 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆38Updated this week
- mist R package files☆10Updated 4 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- Kdrew's scripts for handling protein complex map data☆14Updated 3 months ago
- R package for nucleotide conversion sequencing data analysis☆15Updated 7 months ago