Alternatives and similar repositories for biodiversity_genomics_course:

Users that are interested in biodiversity_genomics_course are comparing it to the libraries listed below

• jamiemcg / BUSCO_phylogenomics
  BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins
  ☆58Updated 3 months ago
• ForBioPhylogenomics / tutorials
  Tutorials on phylogenomic analyses for the ForBio Phylogenomics course
  ☆32Updated 10 months ago
• tonig-evo / workshop-popgenome
  Tutorial about R package PopGenome
  ☆41Updated 5 years ago
• mennodejong1986 / SambaR
  SambaR: Snp datA Management and Basic Analyses in R
  ☆26Updated last week
• speciationgenomics / speciationgenomics.github.io
  Repository for speciation genomics website
  ☆24Updated 5 months ago
• mrmckain / Fast-Plast
  Automated de novo assembly of whole chloroplast genomes.
  ☆44Updated 3 months ago
• esayyari / DiscoVista
  ☆38Updated last year
• PuttickMacroevolution / MCMCtreeR
  MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree
  ☆45Updated 5 years ago
• nt246 / physalia-lcwgs
  Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022
  ☆56Updated 2 months ago
• simonhmartin / tutorials
  Tutorials on evolutionary genomics
  ☆42Updated 2 years ago
• carolindahms / TreeMix
  Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…
  ☆30Updated 10 months ago
• jingwanglab / Populus_genomic_prediction_climate_vulnerability
  ☆37Updated 2 years ago
• AntonelliLab / seqcap_processor
  Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics
  ☆21Updated last year
• rtfcoimbra / Coimbra-et-al-2021_CurrBiol
  Code used to analyse WGS data of giraffe in Coimbra et al. 2021
  ☆11Updated last year
• mfoll / BayeScan
  Detecting natural selection from population-based genetic data
  ☆27Updated 5 years ago
• millanek / tutorials
  Tutorials on phylogenetic and phylogenomic inference
  ☆41Updated 8 months ago
• ranwez / MACSE_V2_PIPELINES
  This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…
  ☆34Updated last year
• Rosemeis / fastmixture
  Software for ancestry estimation in unrelated individuals
  ☆15Updated this week
• fethalen / Patchwork
  Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data
  ☆35Updated 8 months ago
• miriammiyagi / QuIBL
  Quantifying Introgression via Branch Lengths
  ☆49Updated 2 years ago
• darwintreeoflife / darwintreeoflife.data
  Interim data for the Darwin Tree of Life Project
  ☆32Updated 4 years ago
• rhysf / Synima
  Synteny Imager
  ☆60Updated 4 months ago
• nclark-lab / RERconverge
  Analysis of convergence between organismal traits and DNA/protein sequences
  ☆47Updated 6 months ago
• agmcfarland / r_phylogenetics_worshop
  Using ggtree to build phylogenetic trees
  ☆45Updated 2 months ago
• MetazoaPhylogenomicsLab / FANTASIA
  ☆26Updated last month
• shenglin-liu / vcf2sfs
  R functions for generating site frequency spectra (SFS) from a VCF file.
  ☆27Updated 4 years ago
• dportik / SuperCRUNCH
  A bioinformatics package for creating, filtering, and manipulating supermatrices and phylogenetic datasets using GenBank and/or local seq…
  ☆42Updated 8 months ago
• enormandeau / stacks_workflow
  RADseq workflow using STACKS
  ☆57Updated last month
• obenno / ShinySyn
  A shiny application to visualize MCscan result
  ☆34Updated 2 years ago
• edgardomortiz / Captus
  Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
  ☆24Updated this week