biodiversity genomics course by Nicol Rueda, Karin Näsvall, Fernando Seixas and Joana Meier from the Wellcome Sanger Institute
☆68Feb 21, 2026Updated last month
Alternatives and similar repositories for biodiversity_genomics_course
Users that are interested in biodiversity_genomics_course are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Accelerated Bayesian inference of population size history from whole genome data.☆34Sep 29, 2025Updated 5 months ago
- Whole Genome Annotation Pipeline☆16Jun 20, 2025Updated 9 months ago
- This repository contains the code and manual for the R package delimitR.☆17Apr 19, 2022Updated 3 years ago
- Tutorials on phylogenetic and phylogenomic inference☆51May 4, 2025Updated 10 months ago
- ☆12Jan 29, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆17Jan 14, 2026Updated 2 months ago
- Accurate Species Tree EstimatoR: a family of optimation algorithms for species tree inference (including ASTRAL & CASTER)☆229Jan 4, 2026Updated 2 months ago
- SambaR: Snp datA Management and Basic Analyses in R☆32Oct 16, 2025Updated 5 months ago
- Simulation package for getting gene tree distributions and loci / SNPs from input tree topologies and migration / Ne scenarios. Wraps aro…☆14Apr 20, 2024Updated last year
- Improved Inference of Ortholog Groups using Hidden Markov Models☆38Sep 14, 2025Updated 6 months ago
- This is the standalone version of the EviAnn pipeline☆142Mar 13, 2026Updated 2 weeks ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆23Jun 14, 2024Updated last year
- Killifish genomics scripts☆12Feb 19, 2021Updated 5 years ago
- Package for species delimitation analysis☆11Jan 7, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A tool for performing collinearity-incorporating homology inference☆33Oct 7, 2023Updated 2 years ago
- De-novo Assembly Structural Variant Caller☆13Sep 15, 2016Updated 9 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆46Mar 7, 2024Updated 2 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆37Jan 3, 2026Updated 2 months ago
- UCE Bioinformatics Pipeline☆17Sep 29, 2025Updated 5 months ago
- BOSTIn is a new, user-friendly phylogenetic artifact identification package.☆11Jan 20, 2026Updated 2 months ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆35Jan 15, 2025Updated last year
- ☆18Jun 30, 2023Updated 2 years ago
- A program for assessing the T2T genome continuity☆92Feb 28, 2026Updated 3 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Calculate Hybrid Index and Heterozygosity from SNP data☆16Sep 2, 2025Updated 6 months ago
- Repository for speciation genomics website☆27Aug 30, 2025Updated 6 months ago
- a gap-filling tools of genome in complex region.☆25Dec 30, 2025Updated 2 months ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆19Sep 19, 2020Updated 5 years ago
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- WGDI: A user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes☆162Nov 4, 2025Updated 4 months ago
- An R function to compute Concordance Factors from SNP datasets☆15Dec 4, 2025Updated 3 months ago
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆186Dec 19, 2024Updated last year
- Neural network classification of TE☆97Oct 9, 2025Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Make colorful identity heatmaps of genomic sequence☆128May 24, 2024Updated last year
- Helper scripts for processing and visualization of phylogenetics datasets☆31Feb 19, 2024Updated 2 years ago
- conserved non-coding sequence☆16Feb 21, 2022Updated 4 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13May 1, 2019Updated 6 years ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Jun 6, 2024Updated last year
- Topology weighting by iterative sampling of sub-trees☆86Jan 5, 2025Updated last year
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆52Feb 8, 2026Updated last month