rapidspeciation / biodiversity_genomics_course
biodiversity genomics course by Nicol Rueda, Karin Näsvall and Joana Meier from the Wellcome Sanger Institute
☆46Updated 3 weeks ago
Alternatives and similar repositories for biodiversity_genomics_course:
Users that are interested in biodiversity_genomics_course are comparing it to the libraries listed below
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆60Updated 4 months ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- Software for ancestry estimation in unrelated individuals☆18Updated last week
- Tutorial about R package PopGenome☆41Updated 5 years ago
- Tutorials on phylogenetic and phylogenomic inference☆43Updated 3 weeks ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆33Updated 11 months ago
- ☆37Updated 2 years ago
- Automated de novo assembly of whole chloroplast genomes.☆44Updated 4 months ago
- Code used to analyse WGS data of giraffe in Coimbra et al. 2021☆11Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆57Updated 3 months ago
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆35Updated 9 months ago
- SambaR: Snp datA Management and Basic Analyses in R☆27Updated last week
- ☆29Updated 3 years ago
- Using ggtree to build phylogenetic trees☆45Updated 3 months ago
- Repository for speciation genomics website☆24Updated 7 months ago
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆21Updated last year
- Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV☆14Updated last month
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆30Updated 11 months ago
- ☆38Updated last year
- Analysis of convergence between organismal traits and DNA/protein sequences☆50Updated 3 weeks ago
- Synteny Imager☆60Updated 5 months ago
- Workshop on Genomics - Genomics Adventure☆40Updated last month
- Portable solution to generate genome alignment chains using lastz☆54Updated 4 months ago
- ☆69Updated 2 weeks ago
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆58Updated last year
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆71Updated 3 years ago
- RADseq workflow using STACKS☆57Updated this week
- ☆18Updated last year
- paml documentation and tutorials☆51Updated last year