SchlossLab / snakemake_cluster_tutorialLinks
Brief tutorial for using Snakemake to create and submit jobs on a HPC cluster.
☆14Updated 3 years ago
Alternatives and similar repositories for snakemake_cluster_tutorial
Users that are interested in snakemake_cluster_tutorial are comparing it to the libraries listed below
Sorting:
- pathway based data integration and visualization☆41Updated 3 months ago
- viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data☆27Updated 9 months ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- ☆31Updated 4 years ago
- Hclust2 is a handy tool for plotting heat-maps with several useful options to produce high quality figures that can be used in publicatio…☆12Updated 2 years ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- Ultra-fast 5' and 3' demultiplexer☆27Updated last year
- ☆19Updated 2 years ago
- An integrated analysis toolkit and pipeline for Next-Generation Sequencing (NGS) panel sequencing data☆14Updated 6 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆33Updated last year
- Snakemake workflow for neoantigen prediction☆14Updated last year
- A manually curated database of human gut metabolic modules.☆18Updated 6 years ago
- Metagenome analysis using the Kraken software suite☆32Updated 2 years ago
- NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization☆32Updated 5 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆11Updated 4 years ago
- tspex: tissue-specificity calculator☆32Updated 2 years ago
- ☆16Updated last month
- An R Package for Multiplex PCR Primer Design and Analysis☆27Updated this week
- ☆15Updated last week
- Automatically design multiplex PCR primer pairs for diverse templates☆28Updated last year
- Nanopore Real-Time Analysis Tool☆15Updated 10 months ago
- ☆17Updated last year
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- ☆27Updated last year
- FunctionaL Omics Processing platform☆13Updated 11 months ago
- R tool to analyse and integrate multiple -omics data☆13Updated last month
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆26Updated last year
- visual analysis of your VCF files☆34Updated 2 years ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago