The official repository of the Bioconductor 2019 Conference Workshops
☆24Mar 15, 2023Updated 3 years ago
Alternatives and similar repositories for BiocWorkshops2019
Users that are interested in BiocWorkshops2019 are comparing it to the libraries listed below
Sorting:
- Computable build reports, package metadata, and download stats from the Bioconductor project☆22Mar 13, 2026Updated last week
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆34Feb 24, 2026Updated 3 weeks ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Dec 1, 2025Updated 3 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Mar 15, 2023Updated 3 years ago
- A Grammar of Data Manipulation for Omics Data☆21Aug 31, 2020Updated 5 years ago
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Aug 11, 2020Updated 5 years ago
- ☆64Mar 18, 2025Updated last year
- Multi-sample multi-group scRNA-seq analysis tools☆221Mar 8, 2026Updated last week
- Brownian bridge animations using gganimate☆15Sep 6, 2019Updated 6 years ago
- R Interface to the NCBI SRA metadata☆23Nov 19, 2018Updated 7 years ago
- BED QC tool (in the making)☆18Aug 19, 2022Updated 3 years ago
- cfDNA cell type of origin estimation☆34Oct 19, 2023Updated 2 years ago
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Mar 15, 2023Updated 3 years ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 2 years ago
- Paired Replicate Analysis of Allelic Differential Splicing Events☆12Feb 21, 2023Updated 3 years ago
- Develop and host GitHub actions for Bioconductor☆11Apr 22, 2021Updated 4 years ago
- See: https://www.iscb.org/ismb2018/3511#am1☆18Sep 10, 2018Updated 7 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 8 years ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 3 years ago
- Contribute Packages to Bioconductor☆145Apr 10, 2025Updated 11 months ago
- Bioconductor package for management of multi-assay data☆73Nov 17, 2025Updated 4 months ago
- Explore design matrices interactively with R/Shiny☆38Updated this week
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆22Nov 16, 2020Updated 5 years ago
- Project Website:☆54Mar 6, 2026Updated 2 weeks ago
- scID☆14Oct 21, 2021Updated 4 years ago
- R package for specialised analysis of single cell data☆41Oct 14, 2022Updated 3 years ago
- Cell type purification by single-cell transcriptome-trained sorting☆14Jul 8, 2019Updated 6 years ago
- Clone of the Bioconductor repository for the batchelor package.☆18Mar 13, 2025Updated last year
- ☆75Feb 4, 2024Updated 2 years ago
- scDataviz: single cell dataviz and downstream analyses☆66Sep 24, 2021Updated 4 years ago
- SAveRUNNER (Searching off-lAbel dRUg aNd NEtwoRk) - a network-based approach for drug repurposing☆12Nov 27, 2024Updated last year
- The blog of tidyomics☆14Jul 12, 2025Updated 8 months ago
- Deep neural network for predicting methylation states of single cells☆13Jan 19, 2017Updated 9 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆23Feb 28, 2023Updated 3 years ago
- Transcript quantification import with automatic metadata detection☆69Mar 3, 2026Updated 2 weeks ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆167Oct 2, 2025Updated 5 months ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- This python package is for transitioning bioconductor from SVN to git☆14Mar 15, 2023Updated 3 years ago
- The code for Daugherty, et al 2017 - Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans☆11Aug 24, 2017Updated 8 years ago