The official repository of the Bioconductor 2019 Conference Workshops
☆25Mar 15, 2023Updated 3 years ago
Alternatives and similar repositories for BiocWorkshops2019
Users that are interested in BiocWorkshops2019 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Computable build reports, package metadata, and download stats from the Bioconductor project☆22Jul 17, 2026Updated last month
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆37May 14, 2026Updated 3 months ago
- A Grammar of Data Manipulation for Omics Data☆21Aug 31, 2020Updated 6 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆34Dec 1, 2025Updated 8 months ago
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Aug 11, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆65Mar 18, 2025Updated last year
- Multi-sample multi-group scRNA-seq analysis tools☆240Jul 6, 2026Updated last month
- R Interface to the NCBI SRA metadata☆23Nov 19, 2018Updated 7 years ago
- BED QC tool (in the making)☆18Aug 19, 2022Updated 4 years ago
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Mar 15, 2023Updated 3 years ago
- cfDNA cell type of origin estimation☆35Oct 19, 2023Updated 2 years ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 3 years ago
- Paired Replicate Analysis of Allelic Differential Splicing Events☆13Feb 21, 2023Updated 3 years ago
- Develop and host GitHub actions for Bioconductor☆11Apr 22, 2021Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A brief introduction to agentic coding principles and practice☆48Jul 22, 2026Updated last month
- See: https://www.iscb.org/ismb2018/3511#am1☆18Sep 10, 2018Updated 7 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 9 years ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 3 years ago
- Bioconductor package for management of multi-assay data☆76Updated this week
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆23Nov 16, 2020Updated 5 years ago
- Explore design matrices interactively with R/Shiny☆38Apr 28, 2026Updated 4 months ago
- scID☆14Oct 21, 2021Updated 4 years ago
- Cell type purification by single-cell transcriptome-trained sorting☆16Jul 8, 2019Updated 7 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Clone of the Bioconductor repository for the batchelor package.☆19Apr 9, 2026Updated 4 months ago
- R package for specialised analysis of single cell data☆42Oct 14, 2022Updated 3 years ago
- Project Website:☆52Mar 6, 2026Updated 5 months ago
- scDataviz: single cell dataviz and downstream analyses☆67Sep 24, 2021Updated 4 years ago
- ☆76Feb 4, 2024Updated 2 years ago
- The blog of tidyomics☆13Jul 12, 2025Updated last year
- Deep neural network for predicting methylation states of single cells☆13Jan 19, 2017Updated 9 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆25Feb 28, 2023Updated 3 years ago
- Transcript quantification import with automatic metadata detection☆72Jul 20, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- This python package is for transitioning bioconductor from SVN to git☆14Mar 15, 2023Updated 3 years ago
- The code for Daugherty, et al 2017 - Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans☆11Aug 24, 2017Updated 9 years ago
- ☆15May 20, 2026Updated 3 months ago
- 😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎☆144Oct 28, 2025Updated 10 months ago
- ATACseqQC tutorials for BioC 2019 workshop☆19Jul 28, 2020Updated 6 years ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆168Jun 14, 2026Updated 2 months ago