tatsuhikonaito / DEEP-HLA
Upload test
☆21Updated last year
Alternatives and similar repositories for DEEP-HLA
Users that are interested in DEEP-HLA are comparing it to the libraries listed below
Sorting:
- ☆19Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- ☆15Updated 2 years ago
- ☆11Updated 2 years ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆16Updated last week
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago
- ☆38Updated 8 months ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated last year
- ☆34Updated 2 years ago
- This script use to analyze the immune repertoire sequenced by high throughtput sequencing☆25Updated 3 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆21Updated 2 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 2 years ago
- direct comparison of circular and linear RNA expression☆23Updated 4 years ago
- ☆25Updated last year
- ☆25Updated last year
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- Pipeline for Universal Mapping of ATAC-seq☆25Updated last year
- pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data☆35Updated 3 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated last year
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆43Updated last month
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆18Updated 2 months ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆27Updated last year
- code for 'Cell Types of Origin of the Cell Free Transcriptome' by Vorperian et al☆14Updated 3 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆18Updated last month
- Fork of the Polysolver project☆31Updated 5 years ago
- Motif manipulation functions for R.☆28Updated 3 weeks ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆58Updated 5 months ago
- Benchmarking long-read RNA-seq analysis tools☆27Updated 3 months ago
- Locate transgenic insertion sites☆11Updated 2 years ago
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago