mdozmorov / RNA-seq_notesLinks
A continually expanding collection of RNA-seq tools
☆51Updated 9 months ago
Alternatives and similar repositories for RNA-seq_notes
Users that are interested in RNA-seq_notes are comparing it to the libraries listed below
Sorting:
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- Workshop • Analysis of RNA-seq data☆36Updated last year
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆60Updated 7 months ago
- Estimation of Promoter Activity from RNA-Seq data☆53Updated 3 weeks ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- An R interface to the MEME Suite☆52Updated last month
- A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.☆27Updated last year
- A list of alternative splicing analysis resources☆45Updated 4 months ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆78Updated 3 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 4 years ago
- nextNEOpi: a comprehensive pipeline for computational neoantigen prediction☆76Updated 2 months ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 5 months ago
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- ☆15Updated 2 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- ☆20Updated 5 years ago
- ☆38Updated 5 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- GLASS consortium☆39Updated 5 years ago
- This RNAseq data analysis tutorial is created for educational purpose☆33Updated 2 weeks ago
- Tutorial Website☆59Updated 4 years ago
- Website for the precision medicine workshop☆45Updated 2 weeks ago
- ☆60Updated 4 years ago
- A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methyl…☆44Updated last year
- An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis☆22Updated 9 months ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆30Updated last year
- Epimap processing and analysis code repository☆33Updated 2 years ago