☆21Apr 4, 2026Updated last month
Alternatives and similar repositories for antimony
Users that are interested in antimony are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- libRoadRunner: A high-performance SBML simulator☆60Mar 26, 2026Updated last month
- Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.☆23Mar 9, 2026Updated 2 months ago
- MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.☆13Aug 21, 2024Updated last year
- Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML☆28Mar 13, 2023Updated 3 years ago
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆12May 16, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- LibSBML is a native library for reading, writing and manipulating files and data streams containing the Systems Biology Markup Language (…☆56Updated this week
- The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML suppor…☆27Dec 3, 2025Updated 5 months ago
- Rule-based modeling framework☆68May 8, 2026Updated last week
- A tool for creating Python implementations of SBML models.☆15Oct 5, 2022Updated 3 years ago
- The new Reactome REST API to access the data☆11May 15, 2026Updated last week
- Whole-cell modeling tutorials☆17Jun 26, 2020Updated 5 years ago
- Evolving Neural Network through the Reverse Encoding Tree☆15Jun 2, 2021Updated 4 years ago
- A platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results☆43Updated this week
- a C library for symbolic and numerical analysis of a system of ordinary differential equations (ODEs) derived from a chemical reaction ne…☆24Mar 15, 2018Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆21Dec 15, 2025Updated 5 months ago
- Repository for libCellML development.☆18May 7, 2026Updated 2 weeks ago
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆63Mar 27, 2026Updated last month
- Simply Typed Lambda Calculus with de Bruijn indices☆18Mar 20, 2025Updated last year
- Software for in silico evolution - Paul François' group McGill University☆10Mar 16, 2022Updated 4 years ago
- Python utilities for SBML☆41Apr 23, 2026Updated 3 weeks ago
- The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks☆27Updated this week
- SBML differential equation and chemical reaction model (Gillespie simulations) for Julia's SciML ModelingToolkit☆44May 11, 2026Updated last week
- Procedural world game based on raycast rendering and sparse voxel octree technologies with using Vulkan API☆12Updated this week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Ontology of algorithms for analyzing biological models, their parameters, and their outputs☆12Mar 31, 2026Updated last month
- Selecting features as (network) nodes☆11May 27, 2018Updated 7 years ago
- pytest-plus adds new features to pytest☆12Oct 27, 2025Updated 6 months ago
- A general-purpose, stochastic, biochemical reaction simulator for large reaction networks☆15May 12, 2026Updated last week
- High-performance sensitivity analysis for large ordinary differential equation models☆139Apr 29, 2026Updated 3 weeks ago
- A Versatile and Open Source One- and Two-Photon Light-Sheet Microscope Design☆15Jul 27, 2023Updated 2 years ago
- ☆17May 5, 2026Updated 2 weeks ago
- SAT solvers from Knuth's The Art of Computer Programming, Vol. 4B☆10Jan 5, 2026Updated 4 months ago
- ModelPolisher accesses the BiGG Models knowledgebase to annotate SBML models.☆23Jan 28, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Protein common interface databases☆10Apr 13, 2019Updated 7 years ago
- ☆13Aug 5, 2025Updated 9 months ago
- Registry of containerized biosimulation tools that support a standard command-line interface☆15Updated this week
- The Synthetic Biology Open Language (SBOL)☆23Apr 25, 2023Updated 3 years ago
- Public repository of Google Colab notebooks to use with Phenix☆12Mar 19, 2025Updated last year
- A domain-specific language that allows the expression or protein interactions that can be used to build executable models.☆23Dec 13, 2022Updated 3 years ago
- The extension for Sphinx documentation projects that handles redirects for moved pages. Based on the its configuration, the extension gen…☆16Feb 27, 2026Updated 2 months ago