☆20Apr 4, 2026Updated 3 weeks ago
Alternatives and similar repositories for antimony
Users that are interested in antimony are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- libRoadRunner: A high-performance SBML simulator☆59Mar 26, 2026Updated last month
- Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.☆23Mar 9, 2026Updated last month
- MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.☆13Aug 21, 2024Updated last year
- Python Environment for Modeling and Simulating Biological Systems☆137Apr 10, 2026Updated 3 weeks ago
- A simplified python interface to COPASI.☆26Mar 19, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML☆28Mar 13, 2023Updated 3 years ago
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆12May 16, 2023Updated 2 years ago
- LibSBML is a native library for reading, writing and manipulating files and data streams containing the Systems Biology Markup Language (…☆56Mar 12, 2026Updated last month
- The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML suppor…☆26Dec 3, 2025Updated 4 months ago
- A tool for creating Python implementations of SBML models.☆15Oct 5, 2022Updated 3 years ago
- A tool for semantics-based annotation and composition of biosimulation models☆20Jan 6, 2023Updated 3 years ago
- cy3sbml: SBML for Cytoscape 3☆15Jan 22, 2026Updated 3 months ago
- The new Reactome REST API to access the data☆11Mar 13, 2026Updated last month
- Whole-cell modeling tutorials☆17Jun 26, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Use ontology terms in your Python application☆21Jun 6, 2025Updated 10 months ago
- Evolving Neural Network through the Reverse Encoding Tree☆15Jun 2, 2021Updated 4 years ago
- A Python toolbox for COPASI☆13Jun 5, 2024Updated last year
- a C library for symbolic and numerical analysis of a system of ordinary differential equations (ODEs) derived from a chemical reaction ne…☆24Mar 15, 2018Updated 8 years ago
- An application for parameterization of biological models available in SBML and BNGL formats. Features include parallelization, metaheuris…☆24Apr 6, 2026Updated 3 weeks ago
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆63Mar 27, 2026Updated last month
- Simply Typed Lambda Calculus with de Bruijn indices☆17Mar 20, 2025Updated last year
- Software for in silico evolution - Paul François' group McGill University☆10Mar 16, 2022Updated 4 years ago
- Python utilities for SBML☆41Apr 23, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks☆27Updated this week
- SBML differential equation and chemical reaction model (Gillespie simulations) for Julia's SciML ModelingToolkit☆44Updated this week
- Procedural world game based on raycast rendering and sparse voxel octree technologies with using Vulkan API☆12Mar 15, 2026Updated last month
- Selecting features as (network) nodes☆11May 27, 2018Updated 7 years ago
- pytest-plus adds new features to pytest☆12Oct 27, 2025Updated 6 months ago
- A general-purpose, stochastic, biochemical reaction simulator for large reaction networks☆14Apr 17, 2026Updated 2 weeks ago
- High-performance sensitivity analysis for large ordinary differential equation models☆136Apr 14, 2026Updated 2 weeks ago
- A Versatile and Open Source One- and Two-Photon Light-Sheet Microscope Design☆15Jul 27, 2023Updated 2 years ago
- SAT solvers from Knuth's The Art of Computer Programming, Vol. 4B☆10Jan 5, 2026Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ModelPolisher accesses the BiGG Models knowledgebase to annotate SBML models.☆23Jan 28, 2025Updated last year
- Protein common interface databases☆10Apr 13, 2019Updated 7 years ago
- COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.☆125Mar 13, 2026Updated last month
- ☆13Aug 5, 2025Updated 8 months ago
- Registry of containerized biosimulation tools that support a standard command-line interface☆15Updated this week
- Public repository of Google Colab notebooks to use with Phenix☆12Mar 19, 2025Updated last year
- The extension for Sphinx documentation projects that handles redirects for moved pages. Based on the its configuration, the extension gen…☆16Feb 27, 2026Updated 2 months ago