colomoto / colomoto-dockerLinks
The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks
☆27Updated last month
Alternatives and similar repositories for colomoto-docker
Users that are interested in colomoto-docker are comparing it to the libraries listed below
Sorting:
- Brief Python implementation of Most Permissive Boolean Networks☆21Updated last month
- PyIOmica (pyiomica) is a Python package for omics analyses.☆16Updated 3 months ago
- toolkit for the manipulation and analysis of Logical Qualitative Models of biological regulatory networks☆19Updated 2 months ago
- API providing access to papers and authors scraped from biorxiv.org☆56Updated 2 years ago
- scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics☆13Updated 5 months ago
- GeneNetwork (2nd generation)☆38Updated 2 weeks ago
- Spatial Transcriptomics Dashboard☆27Updated 2 years ago
- ☆26Updated 5 years ago
- ☆17Updated 2 years ago
- ☆32Updated last week
- "Independent Component Analysis of BIg Omics Data"☆13Updated 3 years ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 5 months ago
- Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.☆71Updated 3 months ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆46Updated 5 years ago
- "Dimensionality-increasing" data visualization tool and interactive WebGL Jupyter widget built for single-cell data.☆119Updated 3 years ago
- Disease Ontology Semantic and Enrichment analysis☆123Updated last week
- Methods for inferring undirected networks from data☆46Updated 4 years ago
- Boolean Network Modeling☆40Updated 5 years ago
- ☆19Updated 3 years ago
- A collaborative review of the emerging COVID-19 literature. Join the chat here:☆118Updated last year
- A web app that uses machine learning to recommend the most suitable journals based on the text content of your preprint☆22Updated 2 years ago
- A knowledge resource on cell lines - From SIB CALIPHO group☆14Updated last year
- A repository to practice contributing to a Manubot manuscript☆48Updated 7 months ago
- A package that provides data analysis pipeline for flow cytometry.☆79Updated 4 months ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆44Updated 5 months ago
- Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave☆45Updated last year
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆40Updated 4 years ago
- NetworkCommons is a community-driven platform designed to simplify access to tools and resources for inferring context-specific protein i…☆29Updated 5 months ago
- Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.☆23Updated last week
- Single cell network synthesis toolkit☆23Updated 4 years ago