Alternatives and similar repositories for SBO

Users that are interested in SBO are comparing it to the libraries listed below

• gyorilab / pybiopax
  PyBioPAX: A python implementation of the BioPAX object model
  ☆25Updated last year
• biopragmatics / bioregistry
  📮 An integrative registry of biological databases, ontologies, and nomenclatures.
  ☆138Updated this week
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆28Updated this week
• sbmlteam / python-libsbml
  Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.
  ☆23Updated 2 months ago
• HUPO-PSI / psi-mod-CV
  PSI-MOD ontology for modified and unmodified amino acid residues
  ☆14Updated 3 weeks ago
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆57Updated this week
• elixir-europe / biohackathon-projects-2023
  Project code for BioHackathon Europe 2023.
  ☆18Updated last year
• LoLab-MSM / pyvipr
  Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML
  ☆27Updated 2 years ago
• reactome / reactome2py
  python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.
  ☆34Updated last year
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆48Updated this week
• obophenotype / provisional_cell_ontology
  Draft cell type definitions from data - candidates for inclusion in CL
  ☆12Updated 5 months ago
• ebi-chebi / ChEBI
  Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compo…
  ☆51Updated 3 years ago
• Knowledge-Graph-Hub / kg-microbe
  ☆21Updated this week
• Murali-group / PathLinker
  Connect the dots in networks.
  ☆20Updated 5 years ago
• jvrana / benchling-api
  A python wrapper for the benchling api
  ☆50Updated 5 years ago
• PathwayMerger / PathMe
  Harmonizing pathway databases using Biological Expression Language (BEL)
  ☆20Updated last year
• bio-tools / biotoolsRegistry
  biotoolsregistry: discovery portal for bioinformatics
  ☆81Updated last week
• EBISPOT / OXO
  Ontology cross-reference and mapping service
  ☆20Updated 2 weeks ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆33Updated 8 years ago
• evidenceontology / evidenceontology
  Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to c…
  ☆51Updated 6 months ago
• matthiaskoenig / dfba
  Encoding Dynamic Flux Balance Analysis in SBML
  ☆12Updated 5 years ago
• MICommunity / ComplexViewer
  web based visualisation of molecular interaction data
  ☆12Updated 7 months ago
• ginkgobioworks / edge
  Efficiently keep track of changes to genomes
  ☆38Updated last year
• phenopackets / phenopacket-tools
  An app and library for building, conversion, and validation of GA4GH Phenopackets.
  ☆16Updated 5 months ago
• monarch-initiative / biolink-api
  API for linked biological knowledge
  ☆66Updated 3 years ago
• ncats / stitcher
  A stitching platform for InXight
  ☆15Updated 8 months ago
• togoid / togoid-config
  Definition of link data for TogoID
  ☆14Updated last week
• biohackathons / biohackathons.github.io
  International BioHackathon Directory of Events, Projects and Communities
  ☆12Updated 5 months ago
• MoseleyBioinformaticsLab / mwtab
  The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…
  ☆12Updated last week
• Edinburgh-Genome-Foundry / genome_collector
  Easily download genomes and build BLAST/Bowtie indexes in Python
  ☆22Updated 3 years ago