A simplified python interface to COPASI.
☆26Mar 19, 2026Updated last month
Alternatives and similar repositories for basico
Users that are interested in basico are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existin…☆32Apr 14, 2026Updated 2 weeks ago
- Ontology of algorithms for analyzing biological models, their parameters, and their outputs☆12Mar 31, 2026Updated last month
- libRoadRunner: A high-performance SBML simulator☆59Mar 26, 2026Updated last month
- MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.☆13Aug 21, 2024Updated last year
- ☆20Apr 4, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- cy3sbml: SBML for Cytoscape 3☆15Jan 22, 2026Updated 3 months ago
- Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.☆23Mar 9, 2026Updated last month
- Julia for Systems Biology Workshop @JuliaCon 2024☆13Jul 8, 2024Updated last year
- Deprecated: please use GillesPy2☆12Oct 15, 2019Updated 6 years ago
- COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.☆125Mar 13, 2026Updated last month
- Multi-dimensional, trans-omics metabolic maps.☆55Nov 13, 2025Updated 5 months ago
- BioSCRAPE (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)☆30Mar 29, 2025Updated last year
- PyBioPAX: A python implementation of the BioPAX object model☆27May 10, 2024Updated last year
- ModelPolisher accesses the BiGG Models knowledgebase to annotate SBML models.☆23Jan 28, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Tools for programming chemical reaction networks (CRN), DNA strand-displacement circuits (DSD) and genetically engineered circuits (GEC).…☆28Apr 22, 2023Updated 3 years ago
- A package for compositional system analysis and design☆31Jul 22, 2025Updated 9 months ago
- A python library to conjugate spanish words with parameters tense, mood and pronoun☆16Apr 21, 2025Updated last year
- REconstruction of dyNAmIc models through Stratified Sampling using Artificial Neural networks and Concepts of Evolution strategies☆19Feb 13, 2026Updated 2 months ago
- Data-Driven Constraint-based analysis☆12Nov 4, 2022Updated 3 years ago
- A best practices guide for Nextflow on Kubernetes☆21Nov 8, 2023Updated 2 years ago
- Python utilities for SBML☆41Apr 23, 2026Updated last week
- Import SBML dynamic models into the Julia SciML ecosystem for jump (Gillespie), SDE, and ODE simulations☆24Updated this week
- pytest-plus adds new features to pytest☆12Oct 27, 2025Updated 6 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Encoding Dynamic Flux Balance Analysis in SBML☆12Sep 16, 2020Updated 5 years ago
- SAT solvers from Knuth's The Art of Computer Programming, Vol. 4B☆10Jan 5, 2026Updated 3 months ago
- ☆16Dec 8, 2022Updated 3 years ago
- ☆10Dec 15, 2023Updated 2 years ago
- A domain-specific language that allows the expression or protein interactions that can be used to build executable models.☆23Dec 13, 2022Updated 3 years ago
- ☆11Sep 21, 2025Updated 7 months ago
- The HERMES project repository, mostly used to capture meta elements at project level and do project management.☆12Dec 18, 2024Updated last year
- Python package for building SBML models without needing to use libSBML.☆11Aug 18, 2021Updated 4 years ago
- Example of clingo usage on website as a client-side JS program☆14Aug 27, 2019Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A Python Library to interact with the Cell Collective API v2☆12Dec 8, 2022Updated 3 years ago
- Django bulk insert/update☆18Sep 18, 2017Updated 8 years ago
- ☆10May 11, 2021Updated 4 years ago
- Repository of the pipeline of computational methods for logical modelling of biological networks that are deregulated in diseases, develo…☆10Mar 14, 2026Updated last month
- A collection of M models downloaded from published studies☆17Feb 18, 2016Updated 10 years ago
- Reasoning on the response of logical signaling networks with Answer Set Programming☆15Feb 10, 2026Updated 2 months ago
- Implementation of Voronoi with jq☆11Jun 18, 2021Updated 4 years ago