liziyie / scDVALinks
An R shiny based tool used for single cell RNA-seq data visualization and analysis.
☆33Updated 4 years ago
Alternatives and similar repositories for scDVA
Users that are interested in scDVA are comparing it to the libraries listed below
Sorting:
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆64Updated 8 months ago
- ☆50Updated 5 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- ☆61Updated 6 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆42Updated last year
- A R package for advanced single cell data viz☆68Updated last year
- Code repository for single cell RNA-seq☆36Updated 4 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆86Updated last month
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 3 months ago
- R Package for Single-Cell Dataset Processing and Visualization☆63Updated 4 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆33Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- Methods for decontamination of single cell data☆47Updated 5 months ago
- Repository for codes for the HBCA paper☆36Updated 2 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated 9 months ago
- Accurate and fast cell marker gene identification with COSG☆62Updated 2 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated 2 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆83Updated 2 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆107Updated 3 months ago
- SCDC☆45Updated last month
- ☆41Updated 4 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 8 months ago
- Draw phylogenetic trees of tumor evolution☆81Updated 2 years ago
- ☆47Updated 3 years ago
- ☆46Updated 11 months ago
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆119Updated 10 months ago
- Code repository for the Tumor Immune Cell Atlas (TICA) project☆63Updated 3 years ago