interactivereport / bioInfographLinks
bioInfograph: an online tool to design and display multi-panel scientific figure interactively
☆11Updated 3 years ago
Alternatives and similar repositories for bioInfograph
Users that are interested in bioInfograph are comparing it to the libraries listed below
Sorting:
- ☆15Updated last year
- OmicsView: omics data analysis through interactive visual analytics☆16Updated 3 years ago
- CellDepot: A unified repository for scRNA-seq data and visual exploration. J Mol Biol. 2021 Dec 28:167425. doi: 10.1016/j.jmb.2021.167425…☆24Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- ☆29Updated 2 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 7 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated last month
- R package for Bioconductor submission☆37Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆28Updated 3 years ago
- ☆11Updated last year
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Updated 4 years ago
- ☆39Updated last month
- Code repository for the snRNA-seq cross-tissue atlas project☆21Updated 3 years ago
- Clonalscope is a subclone detection method based on copy number alterations (CNAs) for single-cell and ST tumor sequencing data. Clonalsc…☆24Updated 3 weeks ago
- ☆12Updated 6 years ago
- sharing interactive single cell gene expression visualizations from Seurat☆10Updated 2 years ago
- Single-cell Case Control Analysis☆52Updated last week
- RNA-velocity informed embeddings for visualizing cellular trajectories☆45Updated 3 years ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated last month
- Single-cell Mutual Information-based Network Engineering Ranger☆20Updated 2 months ago
- ☆59Updated last year
- Tools for assessing clustering robustness☆25Updated last month
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆19Updated 4 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆22Updated 4 months ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated 2 weeks ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago