Bioconductor / VariantAnnotationLinks
Annotation of Genetic Variants
☆29Updated last month
Alternatives and similar repositories for VariantAnnotation
Users that are interested in VariantAnnotation are comparing it to the libraries listed below
Sorting:
- R interface to genome annotation files and the UCSC genome browser☆33Updated 3 weeks ago
- The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.☆35Updated 10 months ago
- Query the gene models of a given organism/assembly☆27Updated 2 weeks ago
- This is the ensembldb development repository.☆35Updated 11 months ago
- Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import☆28Updated 2 weeks ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆23Updated last week
- A container (S4 class) for matrix-like assays☆36Updated last month
- Representation and manipulation of genomic intervals☆45Updated last month
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆21Updated last month
- Project Website:☆53Updated last month
- A thorough tutorial on HLA imputation and association, accompanying our manuscript "Tutorial: A statistical genetics guide to identifying…☆68Updated 10 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆20Updated 7 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Lollipop-diagram to interactively visualize genetic mutations☆32Updated 11 months ago
- R package wrapping bedtools☆42Updated 4 months ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆12Updated last year
- Glimma R package☆50Updated 11 months ago
- 🧬 o r t h o g e n e 🧬✨✨✨✨✨✨✨ Interspecies gene mapping✨✨✨✨✨ 🦠 🔁 🌱 🔁 🌳 🔁 🍎 🔁 🍊 🔁 🪱 🔁 🪰 🔁 🐟 🔁 🦎 🔁 🐓 🔁 🦇 🔁 🐄 🔁 �…☆44Updated 5 months ago
- Transcript quantification import with automatic metadata detection☆68Updated last month
- Statistical power studies for multi-omics experiments.☆32Updated 6 months ago
- Introduction to the Bioconductor project☆18Updated this week
- DriverPower☆26Updated 6 months ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆25Updated last year
- An R package for generating comparative regional association plots☆18Updated 7 months ago
- Genomic plot in trellis layout☆41Updated last year
- GREAT Analysis - Functional Enrichment on Genomic Regions☆89Updated 5 months ago
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆61Updated 3 months ago
- Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing.☆69Updated 3 years ago