A Vue.js plugin for generating interactive Sankey diagrams using Kraken report data
☆11Jul 22, 2025Updated last year
Alternatives and similar repositories for taxoview
Users that are interested in taxoview are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5☆102Mar 12, 2026Updated 7 months ago
- ☆41Apr 9, 2026Updated 6 months ago
- Fungal Validation and Identification Pipeline☆16Oct 1, 2026Updated last month
- Computing Protein Electric Field Topology in python, built for high-throughput accelerated calculations☆13Updated this week
- Virus Protein Structural Analysis Toolkit☆15Sep 9, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆16Jul 24, 2026Updated 3 months ago
- ☆44Updated this week
- Tool to submit viral sequences to Genbank.☆16May 14, 2026Updated 5 months ago
- Terminal viewer for pdb files☆22Jan 5, 2026Updated 10 months ago
- Parse NCBI CD-search results to find and visualise the domain architecture of secondary metabolite synthases☆26Nov 9, 2022Updated 3 years ago
- Fast indexing and search of discontinuous motifs in protein structures☆223Oct 15, 2026Updated 3 weeks ago
- Rapidly extract reads from FASTX files based on taxonomic classification via Kraken2.☆16Jun 17, 2026Updated 4 months ago
- Tool intended to pull out sequences and annotations between insertion sites specified by the user.☆15Apr 10, 2026Updated 6 months ago
- Polyploid allele identification☆12Jul 8, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A GUI tools for Gap closed based on assembly graph☆14Nov 4, 2025Updated last year
- DyNoPy☆10Sep 5, 2024Updated 2 years ago
- code and source data for de novo design of Kemp elimination paper☆27Sep 18, 2025Updated last year
- Pipeline for Nanopore sequencing: demultiplexing, variant calling, and quality visualization with error handling.☆13May 10, 2026Updated 5 months ago
- "Rewriting protein alphabets with language models"☆27Oct 24, 2026Updated 2 weeks ago
- Repository containing a method for automatically identifying pathogen lineages from a phylogeny.☆18May 19, 2023Updated 3 years ago
- 🦠🧬 Unraveling Viral Genomes from Metagenomes☆11Jul 30, 2026Updated 3 months ago
- Molstar Stories Webapp☆22Oct 28, 2026Updated last week
- interactive phylogenetic tree viewer☆11Jun 26, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆10Jun 9, 2025Updated last year
- Find housekeeping genes in prokaryotic (meta)genomic data☆11Feb 19, 2026Updated 8 months ago
- rapid serotyping of Vibrio parahaemolyticus from whole genome sequencing data using serogroup-specific genes☆10Sep 2, 2021Updated 5 years ago
- In silico Penicillin Binding Protein (PBP) typer for Streptococcus pneumoniae assemblies☆10Aug 6, 2024Updated 2 years ago
- Predictive Algorithm for Resolving A-domain Specificity by featurising Enzyme and Compound in Tandem☆14Oct 15, 2026Updated 3 weeks ago
- Trim lots of metagenomics samples all at once☆10May 2, 2024Updated 2 years ago
- Genome size estimation from long read overlaps☆98Sep 8, 2026Updated 2 months ago
- UFCG: Universal Fungal Core Genes☆37Jul 29, 2025Updated last year
- A tool for motif annotation and visualization in tandem repeats.☆15Oct 23, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆27Sep 14, 2026Updated last month
- codoff: a program to measure the irregularity of the codon usage for a single genomic region (e.g. a BGC, prophage, etc.) relative to the…☆13Jan 19, 2026Updated 9 months ago
- A Transformer-Based Predictor for Nonribosomal Peptide Synthetases (NRPS) Specificity. Published in JACS (DOI: 10.1021/jacs.5c08076).☆12Sep 11, 2025Updated last year
- Fast DNA search and [host] depletion using minimizers☆128Oct 26, 2026Updated last week
- LexicMap: efficient sequence alignment against millions of prokaryotic genomes☆227Updated this week
- RNA virus analysis toolkit☆25Updated this week
- A tool for typing SCCmec cassettes in assemblies☆14Aug 25, 2024Updated 2 years ago