RNA search
☆54Sep 19, 2026Updated 3 weeks ago
Alternatives and similar repositories for riboseek
Users that are interested in riboseek are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Minimum plain text representation of kmer sets☆20Jan 30, 2025Updated last year
- Accelerated short-read alignment, derived from bwa-mem2 — drop-in replacement with correctness fixes, performance improvements, single-bi…☆55Updated this week
- Utilities to manipulate pangenome collections using multi-MUMs☆20Sep 16, 2026Updated last month
- One pure-Rust binary that finds genes in phages, viruses, giant viruses, crassphages, bacteria, archaea, eukaryotes — and raw sequencing …☆36Updated this week
- Robust individual and aggregate checksums for nucleotide sequences☆18Mar 3, 2026Updated 7 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Towards a protein binder candidate for every protein☆43Sep 1, 2026Updated last month
- Eukaryote Genome Annotation☆27Updated this week
- Shared k-mer content between two genomes☆19Jun 21, 2023Updated 3 years ago
- ☆41Sep 6, 2026Updated last month
- High throughput tool for tall and wide multiple sequence alignment.☆32Updated this week
- Alignment against all pre-2019 bacteria on laptops within a few hours (former MOF-Search)☆42Apr 17, 2024Updated 2 years ago
- ViromeScan allows the user to explore and taxonomically characterize the virome from metagenomic reads, efficiently denoising samples fro…☆13Feb 13, 2023Updated 3 years ago
- Unsupervised Deep Gene Finding☆37Updated this week
- MetaProFi is a bloom filter based tool for storing and querying sequence data for accurate identification of functionally relevant geneti…☆13Apr 14, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A C++ package that enables the bulk retrieval, processing, and assembly of transcriptome datasets☆12Jan 20, 2026Updated 8 months ago
- Local alignment search with k-bounded matching statistics.☆24Updated this week
- Phasing of dikaryotic fungal genome assemblies☆13Mar 1, 2023Updated 3 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆18Dec 13, 2024Updated last year
- AlphaProtein Novo☆299Oct 6, 2026Updated last week
- ☆14Jan 31, 2020Updated 6 years ago
- Genomic sequence aligner☆33May 29, 2026Updated 4 months ago
- rnalib: a python-based transcriptomics library☆14Jul 27, 2026Updated 2 months ago
- Easy to use suite for designing a wide range of protein binder modalities.☆431Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Iterative Gene clUster Analysis, a high-throughput method for gene cluster family identification.☆25Aug 19, 2026Updated last month
- Find and visualize rearrangements in DNA sequences☆56Jun 3, 2026Updated 4 months ago
- Genome-on-Diet is a fast and memory-frugal framework for exemplifying sparsified genomics for read mapping, containment search, and metag…☆18Sep 4, 2024Updated 2 years ago
- ☆15Dec 3, 2024Updated last year
- A Model Context Protocol (MCP) server that exposes PyMOL as a typed tool surface to your agent (Claude Code/Desktop, Codex, or any MCP-co…☆105Oct 5, 2026Updated last week
- FastRemap, a C++ tool for quickly remapping reads between genome assemblies based on the commonly used CrossMap tool. Link to paper: http…☆26Aug 24, 2022Updated 4 years ago
- Compares pangenome graphs by calculating the segmentation distance between two GFA (Graphical Fragment Assembly) files.☆15Apr 28, 2026Updated 5 months ago
- A k-mer frequency statistics software☆15Nov 19, 2021Updated 4 years ago
- Bacterial Annotation by Learned Representation of Genes☆61Mar 26, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An R package for predicting ploidal level from sequence data using site-based heterozygosity☆19Aug 30, 2026Updated last month
- Assort phage protein sequences into phamilies using MMseqs2☆12Dec 16, 2024Updated last year
- QuickEd is a high-performance exact sequence alignment based on the bound-and-align paradigm.☆31May 5, 2025Updated last year
- A Unified 3D Generative Model for Synthesizable Structure-Based Drug Design.☆98Oct 10, 2026Updated last week
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated 7 months ago
- CDS prediction in transcripts☆22Mar 5, 2025Updated last year
- 💥 k-mer based variant calling and genotyping — sensitive, fast, and easy to use☆21Updated this week