ocbe-uio / survomicsLinks
Tutorial on survival modeling with omics data
☆11Updated 4 months ago
Alternatives and similar repositories for survomics
Users that are interested in survomics are comparing it to the libraries listed below
Sorting:
- Semi-parametric simulation of bulk and single cell RNA-seq data☆10Updated 8 months ago
- ☆20Updated 3 weeks ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated last year
- A Suite of Packages for Analysis of Big Genomic Data☆34Updated 6 months ago
- Personalized prioritization of driver genes in cancer☆9Updated 3 years ago
- R interface to megadepth: BigWig and BAM related utilities☆12Updated 7 months ago
- TOP results by CONfident efFECT Sizes.☆14Updated 7 months ago
- R package for computation of (adjusted) rand-index and other such scores☆26Updated last year
- R wrapper for utilizing the SigProfilerMatrixGenerator framework☆20Updated 2 years ago
- 1000 Genomes Project Metadata R Package☆20Updated 2 years ago
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆22Updated 8 months ago
- A variable-selection oriented LASSO bagging algorithm for biomarker development in omic-based translational research☆18Updated 2 years ago
- quincunx: an R package to query, download and wrangle PGS Catalog data☆14Updated 2 years ago
- Generate Novel Insights from Gene Correlation Data☆12Updated 3 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 10 months ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- Gene-level general linear mixed model☆22Updated 6 months ago
- A rapido and lightweight method for PGS computation☆14Updated 5 months ago
- countsimQC - Compare characteristic features of count data sets☆28Updated 3 weeks ago
- An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension☆14Updated 2 weeks ago
- Bioconnector Workshops☆32Updated 6 years ago
- Kinship In Mixed Model Analysis of RNA-seq☆13Updated 3 months ago
- GWAS and rare variants tests at high speed using regenie☆15Updated 7 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 3 months ago
- amplicon/smMIP mapping and analysis pipeline☆11Updated 2 years ago
- Targeted and non-targeted anticancer drugs and drug regimens☆29Updated last month
- ☆12Updated 4 years ago
- Differential analysis of multi-omics data based on the Tweedie distribution☆28Updated last year
- Type 2 diabetes and dementia in the Health and Retirement Study: A Mendelian randomization approach☆15Updated 2 years ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated last month