ocbe-uio / survomicsLinks
Tutorial on survival modeling with omics data
☆11Updated 5 months ago
Alternatives and similar repositories for survomics
Users that are interested in survomics are comparing it to the libraries listed below
Sorting:
- Semi-parametric simulation of bulk and single cell RNA-seq data☆10Updated 9 months ago
- A Suite of Packages for Analysis of Big Genomic Data☆34Updated 7 months ago
- ☆20Updated last month
- R package for computation of (adjusted) rand-index and other such scores☆26Updated last year
- TOP results by CONfident efFECT Sizes.☆14Updated 8 months ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated last year
- Methods used in the article "Assessment of statistical methods from single cell, bulk RNA-seq and metagenomics applied to microbiome data…☆10Updated 5 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆14Updated 3 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆30Updated 4 months ago
- 1000 Genomes Project Metadata R Package☆20Updated 2 years ago
- countsimQC - Compare characteristic features of count data sets☆28Updated last month
- An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension☆14Updated last month
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Updated 4 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆31Updated 11 months ago
- Bioconnector Workshops☆32Updated 6 years ago
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- GridLMM package☆39Updated 3 months ago
- Interactive benchmarking of ranking and assignment methods☆16Updated last month
- Quantitative Trait Cluster Association Test in R☆25Updated 4 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Updated 4 months ago
- R wrapper for utilizing the SigProfilerMatrixGenerator framework☆20Updated 2 years ago
- ☆12Updated 4 years ago
- Extended ComplexHeatmap☆11Updated 7 months ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Updated last year
- A variable-selection oriented LASSO bagging algorithm for biomarker development in omic-based translational research☆18Updated 2 years ago
- Targeted and non-targeted anticancer drugs and drug regimens☆29Updated 3 weeks ago
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 5 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated last month
- Generate Novel Insights from Gene Correlation Data☆12Updated 3 years ago
- Single sample network reconstruction in R☆23Updated 5 years ago